Ruegeria sp. TM1040: TM1040_1026
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Entry
TM1040_1026 CDS
T00359
Name
(GenBank) aconitase
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00020
Citrate cycle (TCA cycle)
sit00630
Glyoxylate and dicarboxylate metabolism
sit00640
Propanoate metabolism
sit00720
Other carbon fixation pathways
sit01100
Metabolic pathways
sit01110
Biosynthesis of secondary metabolites
sit01120
Microbial metabolism in diverse environments
sit01200
Carbon metabolism
sit01210
2-Oxocarboxylic acid metabolism
sit01230
Biosynthesis of amino acids
Module
sit_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sit_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TM1040_1026
00630 Glyoxylate and dicarboxylate metabolism
TM1040_1026
00640 Propanoate metabolism
TM1040_1026
09102 Energy metabolism
00720 Other carbon fixation pathways
TM1040_1026
Enzymes [BR:
sit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
TM1040_1026
4.2.1.99 2-methylisocitrate dehydratase
TM1040_1026
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase
Aconitase_B_N
Motif
Other DBs
NCBI-ProteinID:
ABF63759
RoseoBase:
TM1040_1026
UniProt:
Q1GHV7
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All DBs
Position
1097776..1100565
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AA seq
929 aa
AA seq
DB search
MSLYTDYLNEIETRKGEGLHPKPIDDGALVAELIAQIKDTGSEHREDSLKFFIYNTLPGT
TSAAGVKAAFLKEIILGEAEVAEITPEFAFELLSHMKGGPSVEVLLDLALGEDAGIAQQA
ADVLKTQVFLYEADTDRLEAAYKAGNAIAREILESYAKAEFFTKLPDVDDEIKVVTYIAA
EGDISTDLLSPGNQAHSRSDRELHGKCMISEAAQKEIEALKLQHPDKRVMLIAEKGTMGV
GSSRMSGVNNVALWTGKQASPYVPFVNYAPVVAGTNGISPIFLTTVGVTGGIGLDLKNWV
KKVDSDGKAILNNDGNPVLEQKYSVETGTVLKIDTKNKKLLSEDGEELVDVSSAFTPQKV
EFMKAGSSYAIVFGKKLQTFAAETLGIEAPLVFAPAKEVSHEGQGLTAVEKIFNRNAVGS
TPGKTLHAGSDVRVKVNIVGSQDTTGLMTSQELEAMAATVISPTVDGAYQSGCHTASVWD
KKAQANIPRLMKFMNNFGLITARDPKDQYHAMTDVIHKVLNDLTVDDWDIIIGGDSHTRM
SKGVAFGADSGTVALALATGEATMPIPESVKVTFKGKMADHMDFRDVVHATQAQMLKQHG
DNVFQGRVIEVHIGTLLADQAFTFTDWTAEMKAKASICISNDDTLIGSLELAKSRIQIMI
DKGMDNEAGTLQGLIDKADKRIAEIRSGEKPALSPDDSAKYYAEVVVDLDEINEPMIADP
DVNNEDVSKRYTHDTIRPISFYNAEKKVDLGFVGSCMVHKGDMKIVAQMLKNLEKANGKV
EFKAPLVVAAPTYNIIDEMKAEGDWEILQKYSGFEFDDLFPKSQARTEYENILYLERPGC
NLCMGNQEKAAKGDTVLATSTRLFQGRVVEDAAEKKGESLLASTPVVVLSAILGRTPTIE
EYKTAVEGIDLTKFAPPVEKPAGTRSAHF
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtacacagactacctaaatgagatcgaaacccgcaaaggcgaggggctgcac
cccaagcccatcgacgatggcgcgctggttgcggaattgattgcgcagatcaaggacacc
gggagcgagcatcgtgaagactctctgaagttcttcatttacaacaccttgcccggcacc
acgagcgctgcaggtgtcaaggcggcgtttctcaaagagatcattctgggcgaggccgag
gtggctgaaatcacgcccgagttcgcctttgaactgctgtcgcacatgaagggtggtccc
tcggtcgaggtgcttctggatctggccctcggtgaggatgcagggatcgcccagcaggcc
gcagacgtgctgaagacacaggtgttcctctatgaggcggacaccgatcgtctcgaagca
gcttacaaggctggcaatgcgattgcgcgtgagatcctcgagagctacgccaaggccgag
ttctttaccaagcttcccgatgtggatgatgagatcaaggtcgtgacctacatcgccgcc
gaaggcgatatctccaccgaccttctgtccccgggcaatcaggcgcactcgcgttcggat
cgggaactgcatggcaaatgcatgatctccgaggcggcgcaaaaggagatcgaggcgctg
aagctgcagcaccccgacaagcgcgtgatgctgatcgcggaaaaaggcaccatgggcgtg
ggctcctcgcggatgtccggcgtcaacaacgtggcgctctggaccggcaaacaagccagc
ccctatgtgccgtttgtgaactatgcccctgtggttgcgggcaccaatggcatctcgccg
attttcctcaccaccgtgggcgtgaccggcggcattggcctcgacctcaagaactgggtc
aagaaggtcgatagcgacggcaaggcgatcctcaacaacgacggcaacccggtgctggag
cagaagtattctgttgaaaccggcacggtgctgaagatcgacaccaagaacaagaagctc
ctgagcgaagacggcgaggagctggtggatgtctcgtccgcgtttacgccccagaaggtc
gagttcatgaaggcgggcagctcttatgccatcgtctttggcaagaaactgcagacattt
gcggccgagaccctcggcatcgaggcgccgctggtctttgcaccggcgaaagaagtcagc
cacgagggccagggcctgactgcggttgaaaagatctttaaccgcaatgccgtgggcagc
acgccgggcaagacgctccatgcgggctctgacgtgcgcgtgaaggtcaacattgtcggc
tctcaggacaccactggtctcatgacctcgcaagaactggaggccatggcggccaccgtg
atctcgccgaccgtggatggggcctatcagtccggctgtcacaccgcgtccgtgtgggac
aagaaggcacaggccaacattccgcgtctgatgaagttcatgaacaacttcggcctgatc
accgcgcgcgatccaaaggatcagtatcacgcgatgaccgacgtgatccataaggtgctg
aacgacctcaccgtggatgactgggacatcatcatcggcggcgacagccacacccgcatg
tccaaaggcgtggcctttggtgcggactcgggtaccgtggcgctggcgctggcaaccggt
gaggcgaccatgccaatccccgagtcggtcaaagtgaccttcaagggcaagatggccgac
catatggacttccgcgatgtggttcacgccacccaggcgcagatgctcaagcagcatggc
gacaacgtcttccagggccgcgtcatcgaggtccacatcggcacgctcctggcagaccag
gcctttaccttcaccgactggacggccgagatgaaggccaaggcgtcgatctgtatctcc
aatgacgatacgctcatcggctcgctcgagctcgccaagagccgcatccagatcatgatc
gacaaaggcatggacaacgaggcgggtaccctccaggggctgatcgacaaggccgacaag
cgcatcgccgagatccgctccggtgagaagccggccctgtcgcccgacgacagcgccaag
tattacgccgaagtggtggtcgatctcgacgagatcaacgagccgatgattgccgacccg
gacgtcaacaacgaggacgtctccaagcgctacacccacgacaccatccgtccgatctct
ttctataacgcagagaaaaaggtcgatcttggctttgtgggctcctgcatggtgcacaag
ggagacatgaagatcgtggcgcagatgctcaagaacctcgagaaagccaacggcaaggtc
gagttcaaggctccgctcgtggtggccgcgccgacctacaacatcatcgacgagatgaag
gccgaaggtgactgggagatcctgcagaaatactcgggctttgagttcgacgatctgttc
ccgaaatcgcaggcgcggaccgagtatgaaaacatcctctatctggagcgtccgggctgt
aacctctgcatgggcaaccaggaaaaggccgccaagggtgacaccgttctggccacatcg
acccgcctgttccagggccgtgtggtggaagatgccgccgagaagaaaggcgagagcctt
cttgcctcgaccccggttgtggtgctctcggccattctgggtcgcacgccaacgatcgag
gaatacaagaccgccgtggagggtattgacctcaccaaatttgcccctccggtcgaaaaa
ccggcaggaacgcgctcggcgcatttctaa
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