Ruegeria sp. TM1040: TM1040_1055
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Entry
TM1040_1055 CDS
T00359
Name
(GenBank) aminodeoxychorismate lyase
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
TM1040_1055
Enzymes [BR:
sit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TM1040_1055
Peptidoglycan biosynthesis and degradation proteins [BR:
sit01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TM1040_1055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
Motif
Other DBs
NCBI-ProteinID:
ABF63788
RoseoBase:
TM1040_1055
UniProt:
Q1GHS8
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Position
1134335..1135489
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AA seq
384 aa
AA seq
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MWRSLASNMLTILIVGLFLFAGVILWGKNEYTAEGPLSEAICFQVPSGTNMARVSRRLES
DGVVSSGTIFRIGVKYSDKAQDLKAGSYLVEPGASMEGIVDQITRGGASTCGTEIVYRVG
VTRVLAEVRELDPATNAFVERAEFVPGVDETPAVYTEKKSEADTRYRIALAEGVTSWQVV
ESLKAMDILEGEPGRRPPEGSLAPDSYEVRPGTSREAVLAEMQARQDRRIADAWEARSPD
AAVKTPEEMLILASIIEKETGVAEERGVVASVFTNRLRRGMRLQTDPTVIYGVTKGEGVL
GRGLRQSELRGATPWNTYVIEGLPPTPIANPGLESLVAAVNPDQTDYVFFVADGTGGHAF
AETLEEHNRNVAKWRKIEAERNNN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgcagtctggcctcgaacatgctgacgatcctgatcgtcggcctgtttctcttc
gcgggggtgatcctgtggggcaagaatgaatacaccgccgagggccccctgtccgaagcg
atctgttttcaggtgccctcggggaccaatatggcacgggtgtcgcgccgtcttgaaagc
gacggcgtggtctcgagcggcaccatctttcgcatcggggtgaaatattccgacaaggcg
caggacctcaaggcaggcagctaccttgtggagcccggcgcttcgatggaagggatcgtg
gatcagatcacccggggcggggcctccacctgtggcaccgagatcgtctatcgcgttggc
gtgacccgcgtgctggccgaggtgcgcgagctggacccggcgaccaacgcctttgtggaa
cgtgctgaatttgtccccggcgtggatgagacccccgcggtctataccgagaaaaaatcc
gaggctgacacgcgctaccgtattgcactggcagaaggcgtgaccagctggcaggtggtc
gagtccctgaaggcgatggacattctcgagggggagccgggccgccgtccgccggagggc
agccttgcgcccgacagctacgaggtccgccccggaacctcgcgcgaggcggtgctggcc
gagatgcaggcgcggcaagacaggcggatcgcggacgcctgggaagcccgtagccccgat
gcggctgtcaaaaccccagaggaaatgctgatcctcgcctcgatcatcgagaaggaaacc
ggcgttgctgaggaacgcggtgtggtggcctctgtcttcaccaaccgcctgcggcgcggc
atgcgccttcagaccgaccccacggtgatctatggtgtgaccaagggagagggcgttctg
ggccggggcctacggcagagcgagctgcgcggcgcaacgccgtggaacacgtatgtgatc
gaaggtcttccaccaacacccatcgccaatcccgggcttgaaagcctggtggcggcagtg
aacccggatcagactgactatgtgttctttgtggccgatggcaccggcggccatgctttt
gccgaaacgctcgaagagcacaatcgcaacgtcgcgaaatggcgaaagatcgaagccgag
cgcaacaacaactga
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