Ruegeria sp. TM1040: TM1040_1157
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Entry
TM1040_1157 CDS
T00359
Name
(GenBank) HhH-GPD
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TM1040_1157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sit03400
]
TM1040_1157
Enzymes [BR:
sit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TM1040_1157
DNA repair and recombination proteins [BR:
sit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TM1040_1157
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Halogen_Hydrol
Motif
Other DBs
NCBI-ProteinID:
ABF63890
RoseoBase:
TM1040_1157
LinkDB
All DBs
Position
1248737..1249369
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AA seq
210 aa
AA seq
DB search
MTVGRLIETPACVAEGAAWLAAQEPRFAEALAQTGDLPLRRKPDGFAQLLSAIVSQQVSV
ASANAIWARMRAANLTGPRKIQWASDEDLRAAGLSRQKIRYARALSEARIDFKALRHAPT
AEVIAELTQVSGIGVWTAEIYAMFSLGRADVFAPGDLALQESARMLFDLSERPKERALRE
MAEAWSPWRSVAARLLWAYYHVAKDREGIR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgggccgcctgatcgagaccccggcctgcgtggccgaaggggctgcctggctg
gcggcgcaagagccacgctttgccgaagcgctcgcgcagaccggggacttgccgctgcgg
cgcaagcctgacgggtttgcacagcttctcagcgccattgtcagccagcaggtctcggtg
gcgtcggccaatgcgatctgggcgcggatgcgggccgccaatcttactgggccgcgcaag
atccaatgggccagcgacgaggatctgcgcgcggccggactcagtcgccagaagatccgc
tatgcccgtgccctgtcggaggcacgcattgatttcaaggcgttacggcacgctcctaca
gcggaggtgatcgccgaactgacacaggtttcagggatcggggtctggacggcagagatt
tacgcgatgttttccttggggcgcgctgatgtctttgcgcctggcgatctggccctgcaa
gagagcgcgcggatgctttttgatctgtccgagcgccccaaagagcgcgccctgcgcgag
atggcagaggcctggtcaccgtggcgctcggttgcggcgcggcttttgtgggcctattac
catgtggcaaaggacagggaagggatccgatga
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