Ruegeria sp. TM1040: TM1040_1272
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Entry
TM1040_1272 CDS
T00359
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
sit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_1272
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM1040_1272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_1272
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
TM1040_1272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ABF64005
RoseoBase:
TM1040_1272
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All DBs
Position
1370689..1371888
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AA seq
399 aa
AA seq
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MKKLLTATAAIALSAGTAFADGHGHPDEVKLGVLFGFTGPIESLAPTMASGAELAMSEVT
ESGKLFGGAKVTPMRADTGCIDNGLATANAEKLIADGANGIVGGDCSGVTGAILQNVAIP
NGMVMISPSASSPGLTSMEDNGLFFRTTPSDARQGEIMASILADRGVDSIAITYTNNDYG
KGLSDSIKSAFEAAGGEVTIVTAHEDGKGDYSAEVAALASAGGDILVVAGYLDQGGLGII
QGALDTGAFDTFGLPDGMIGDSLPNNVGPDLNGSFGQIAGSDSEGAEMFAAKASELGFDG
TSAYSPESYDAAALFLLAMQASGSVDPKDYVAKITEVANAPGEKINPGELGKALEILANG
GEIDYEGATGVNLIGPGESAGSFREIEVQDGKNVTVKFR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgctgaccgcgacggcagccatcgcattgagcgctggcaccgcgtttgca
gacggccacggccaccccgacgaagtaaagctgggtgtcctgtttggcttcaccggcccg
atcgaatccctggcgccgaccatggcctctggtgctgaactcgcgatgtccgaagtcacc
gagtccggcaaactctttggcggtgcaaaagtgaccccgatgcgcgcggacaccggctgt
atcgacaatggtcttgcgactgcgaacgcagaaaagctgatcgcagatggcgccaacggc
atcgtgggtggtgactgttccggcgtgaccggcgcgatcctgcagaacgtcgcgatcccg
aacggcatggtgatgatttctccctccgcaagctcgccgggtctgacctcgatggaagac
aacggcctgttcttccggaccaccccgtctgacgcacgtcagggcgagatcatggcgtcg
atccttgcagatcgtggcgtcgacagcatcgccatcacctataccaacaacgattacggc
aagggtctgtcggattcgatcaaatccgcattcgaggccgcaggcggtgaagtcaccatc
gtgaccgcgcatgaagacggcaagggtgactactctgccgaggttgcggcgctggcatca
gccggtggcgatattctggttgttgcgggctatctcgaccagggtggtctgggcatcatc
cagggcgcgctcgacaccggtgcgttcgacacctttggtctgccggacgggatgatcggc
gattcgctgcccaacaacgtgggcccggacctcaatggctccttcgggcagatcgccggc
tctgacagtgaaggtgccgagatgttcgctgccaaagcctccgagcttggctttgacggt
acttctgcctattcgccggaatcctatgatgcggcagcgcttttcctgctcgcgatgcag
gcatcgggctctgttgatcccaaggattacgtcgccaagatcaccgaagtcgccaatgct
ccgggtgagaaaatcaaccccggtgagctcggcaaagcgctcgaaattctcgccaatggc
ggtgagatcgactatgagggcgcaaccggcgtcaacctgatcggccccggcgagagcgca
ggctctttccgtgagatcgaagttcaggacggcaagaacgtgaccgtgaaattccgctaa
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