Ruegeria sp. TM1040: TM1040_1386
Help
Entry
TM1040_1386 CDS
T00359
Name
(GenBank) transcriptional regulator, GntR family
Organism
sit
Ruegeria sp. TM1040
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
DegT_DnrJ_EryC1
Beta_elim_lyase
HTH_Crp_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ABF64119
RoseoBase:
TM1040_1386
UniProt:
Q1GGU7
LinkDB
All DBs
Position
complement(1480196..1481611)
Genome browser
AA seq
471 aa
AA seq
DB search
MGTIWPSTLTGSLTEKPGPKYKRVADTIRLAVESGTLQVGAKLPPVRELAYQLSITPGTV
ARAYTILTDEGILQAEVGRGTFVAERETAVMDDVWSRQLHLLERSNPNHVSLFSPRLVDV
GQVKLIREALRKAADCDRLALLNYPTRDAYQPVRQAVVDWLSDTPLGPLSERDVVLTHGG
QNAVMTVMQAILKESNPTILVEDLSYAGFRRAAEILRAKVVGVAIDENGIVPEALEAAIK
KSGASVLCTSPEVHNPTGAFTPLERRKEILAILRRHNVQLIEDDCYRMGEARAPTYRALA
PELSWHVTSISKSLTPALRVGFAIAPVGKSADLRRVAEYGFFGLAQPLAEVTRLLLSDPR
SKKLVQTVRDEMAEYVRVAVNALGAFELTWDSQVPFLWLRLPSGWRAGAFTRAAEGQGVQ
LRSADEFALRDGRAPNAVRIAVNGHVTLARFEDAMLRLRMLLDNPPEQISV
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaatttggccctccaccctgaccgggtccctgaccgaaaagccggggcccaag
tacaagcgcgtggctgatacgatacgattggcggtggagagtggtacattgcaggtgggc
gcaaagctgccgcctgtccgcgagctcgcctatcagctcagtatcacgcctggcaccgtc
gcgcgggcctacacgatcctgacagacgagggcatcttgcaggccgaggtcggacgcgga
acctttgtggccgaacgcgaaacggctgtgatggatgacgtctggtcgcggcagttgcat
cttcttgaacgcagcaaccccaatcacgtctctctgttcagcccgcgtcttgtcgacgtg
ggtcaagtcaagctgatccgcgaagcgctccgaaaagccgctgattgcgaccgcttggcg
ttgttgaattatccgacgcgcgacgcctatcagccggtgcgccaagcggttgtcgactgg
ctatccgataccccgctcgggccactgagtgagcgcgatgtggtcttgacccatgggggc
cagaatgccgtcatgacggtgatgcaagcgatcctgaaagagagcaatcccaccatcttg
gtcgaggacctctcttatgccgggttcaggcgcgctgcagagatcctgcgtgccaaagtg
gtcggtgttgcgatcgacgaaaacggcattgtgccagaggcgttggaggctgcgatcaag
aaatcgggtgcatctgtactttgtaccagtcccgaagtgcacaatccaaccggcgctttt
accccgcttgaacggcgcaaagagatcctcgccatattgagacgacacaatgtacaattg
atcgaggacgattgttatcgcatgggggaggcccgcgcgccgacctatcgcgcgctcgcg
ccggagctcagctggcatgtgacatcgatttccaaatcgctcaccccggcgctgcgggtg
gggtttgcaatcgcccccgtcggcaaatccgcagatctgcgccgcgttgcggaatacggt
ttctttgggcttgcgcagccgctcgccgaggtgacacgcctgctattgtcggacccgcgc
agcaagaagctggtccagaccgtgcgcgacgagatggcggaatatgtccgtgtcgccgta
aacgccctcggagcctttgaactcacctgggactcgcaggtgccgttcctttggctgcgg
ctgccttcgggctggcgagcgggtgcgtttacacgtgcggccgaagggcagggggtgcaa
ctgcgctctgcagatgagtttgccctgagggacgggcgtgcgcccaatgcagtgcgcatc
gccgtcaatgggcatgtcacgctggcgcgatttgaggatgccatgctgcgtttgcgcatg
ctattggacaacccaccagagcaaatcagcgtctga
DBGET
integrated database retrieval system
