Ruegeria sp. TM1040: TM1040_1417
Help
Entry
TM1040_1417 CDS
T00359
Name
(GenBank) Twin-arginine translocation pathway signal
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM1040_1417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_1417
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TM1040_1417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
YqhI
Motif
Other DBs
NCBI-ProteinID:
ABF64150
RoseoBase:
TM1040_1417
UniProt:
Q1GGR6
LinkDB
All DBs
Position
1510334..1512001
Genome browser
AA seq
555 aa
AA seq
DB search
MTTTKLKSSTTHHWAAEMHAQELKAGKISRREFLTRATALGVSATAAYGMIGLSAPARAA
DNMKEGGTLRVQMSVRGLKDPRTFDWSEIGNQARGTLEYLVEYNNDGSFTPMLLESWQVN
DSADEYTLNVRKGVKWNNGDDFTAEDVARNIEGWCDKDMEGNSMAGRFATLVDPDTGKAI
EGAIEVVDSHTVKLKLPNSDISIIPGMADYPAAITHASFSADDAQNAVGTGPYLISELEV
GVKCVLTRNENHSWWGEAIYGKPALDSIEYIDFGTDPSSWLAALESEEVDMLYESVGEFI
DLMDSLGFVKSEVVTMATIVVRPNQLAEVDGMSPYADKRVRKALQMAVDNDVCLELGYGN
RGVAAENHHVGPAHPEYAELPKEAADPDGARALMEEAGMMDFEHELFSIDDDWRKNTTDA
VAAQLRDAGFKVKRTVLPGSTFWNDWTKYPFSSTNWNHRPLGVQIWALAYRSGEAWNEFG
WSNPEFDQILADALAIADADARREVVAKGQKMIQDEGVTIQPYWKSLFRHMREGVRGADM
HISYEHHHYKWGWAA
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccaaactcaagagctcgacgacccatcattgggcggctgagatgcatgcg
caggaactgaaggcgggcaagatctcgcgccgcgagttcctgacccgtgcgacagcgctt
ggtgtctcggccaccgccgcctatgggatgatcggcctgagcgcccctgcccgtgcggcg
gacaacatgaaagaaggcggcaccctgcgcgtgcaaatgagcgtgcgcggcctcaaggat
ccccgcaccttcgactggtccgaaatcggcaaccaggcgcgtggcacgcttgaatacctg
gttgaatacaacaacgacggctccttcaccccgatgctcctggagagctggcaggtgaat
gacagcgccgatgaatacaccctgaacgttcgcaagggcgtcaaatggaacaacggcgac
gactttaccgccgaagatgtggcccgcaacatcgaaggttggtgcgacaaggacatggaa
ggcaactccatggctggccgctttgccacgcttgtcgatcccgacaccggcaaagccatc
gagggcgcgatcgaggtggtagacagccacaccgtgaaactgaaactgcctaactccgac
atttccatcattccgggcatggcggattatccggcagcgatcacccatgcgagctttagc
gcggatgatgcgcaaaacgccgtgggcaccggtccctatctgatttccgagctcgaagtc
ggcgtcaaatgcgtgctcacgcgcaatgagaaccacagctggtggggtgaagcgatctac
ggcaagccggcgctcgacagcatcgaatacatcgatttcggcaccgatccgtcgtcgtgg
ctggcagcgctggaatccgaagaagtcgatatgctctatgaatccgttggcgaattcatc
gacttgatggactcgcttggcttcgtgaaatccgaagttgtcaccatggcaaccatcgtc
gtgcgtcccaaccagctggccgaggtggacggcatgtccccctatgccgacaaacgcgtg
cgcaaggcgctgcagatggcggtggacaatgatgtctgcctggagcttggctatggcaac
cgcggtgttgctgcggaaaaccatcacgtcggcccggcgcatcctgaatatgccgagctc
cctaaagaggcggctgatcccgatggcgcccgcgcgctgatggaagaagccggcatgatg
gatttcgaacatgagctcttctccatcgacgatgactggcgcaagaacaccaccgatgcg
gtcgctgcccagctgcgtgacgcggggttcaaggtcaagcggaccgtgctgccgggatcg
accttctggaatgactggaccaaatatccgttcagctcgaccaactggaaccaccgtccc
ttgggtgttcagatctgggcgctggcctaccgttcaggtgaggcctggaacgaattcggc
tggtccaaccccgagttcgaccagatcctggccgacgcgcttgccatcgccgatgccgac
gcgcgccgcgaagtcgtcgccaaaggtcagaagatgatccaggacgagggtgtcaccatc
cagccctattggaaatccctgttccgtcacatgcgcgaaggcgtgcgcggtgccgatatg
catatctcctacgagcaccatcactacaaatggggctgggctgcctga
DBGET
integrated database retrieval system
