Ruegeria sp. TM1040: TM1040_1462
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Entry
TM1040_1462 CDS
T00359
Name
(GenBank) periplasmic sensor signal transduction histidine kinase
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TM1040_1462
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sit01001
]
TM1040_1462
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sit02022
]
TM1040_1462
Enzymes [BR:
sit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
TM1040_1462
Protein kinases [BR:
sit01001
]
Histidine kinases
NtrC family
TM1040_1462
Two-component system [BR:
sit02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
TM1040_1462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
dCache_1
HisKA
HATPase_c_5
HATPase_c_3
HATPase_c_2
Diacid_rec
Motif
Other DBs
NCBI-ProteinID:
ABF64195
RoseoBase:
TM1040_1462
UniProt:
Q1GGM1
LinkDB
All DBs
Position
complement(1562751..1564553)
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AA seq
600 aa
AA seq
DB search
MTASEETPGAKPPAPSERRAERPTLRSRTISWRVRLALVAFMAIAGATVWFTNSTLTHSF
TETTRNRAELRLALYSGNLVSELRRHAIVPQLLSRDQALISALQSQDFSLSTQRLISFVD
EIGAASITLMDRDGRTVAATDRVRLGEIYRNAPFFVEAIRSNATVFSVIPREVRGYQFTY
SRRLVDSSGTLGVIMVEVDLQKFERAWAGISDAVMVADSTGTVVLATEARWRGLSEGEAL
KEQTPEGAIQRAIRATADWAALPTDVYLQGEAVMRLETRVPFQGWRMMSYTTYDSIREQV
NAVIALEIMGFAILLALAFYALSRKTALRMALFQRESAELRVLNARLQREIAERERVQKT
LAVAEQSLAQSSKLAALGEMSAAVSHELNQPLAAMKTYLAGARLLLQRNRPDEALSSFGR
IDDLIERMGAITRQLKSYARKGGDAFSPVNMGDALASSLSMMEPQLRQRHVQITRILPDE
PVFVMADRMRLEQVMVNLLRNALDATKSVEEPEVEIILAAGETATLTVRDNGDGIQDFDS
LFEPFYTTKQPGDGVGLGLAISSGIVNDLGGRLTARNSDAGGAVFEMQLPILMDGIEAAE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctctgaggagactcccggcgcaaagccgcctgcgccttctgaacgtcgtgct
gagcgcccgacgttgaggtcgcgcacgatctcctggcgcgtgcgcctggcacttgtggcc
ttcatggccatcgcaggggcgaccgtctggttcaccaactccacgttgacccacagtttt
accgagaccacacgcaatcgggcggaactgcggcttgcgctttattcaggcaacctcgtc
agcgaattgcgccgccacgcgattgtgccgcagcttctgtcgcgcgaccaggcgctgatc
tcggcgctgcagagccaggatttttcgctttcgacccagcgcctcatttcctttgttgat
gaaatcggtgcggcctccataaccttgatggaccgagatgggcgcacggttgcggccacg
gatcgtgttcgactcggtgaaatctatcgcaatgcgcccttctttgttgaggcaatccgg
tcgaacgccaccgtgttttcggtgatcccgcgcgaggtgcgggggtatcaattcacgtat
tcgcgccgtctcgtcgacagcagcggcacgcttggcgtcattatggtcgaggtcgatctg
caaaagttcgaacgcgcctgggcgggcatttccgacgccgtgatggtggccgacagcacc
ggcaccgttgtgctcgccacagaggcgcgctggcgggggctctcggaaggggaggccctg
aaggagcaaacaccggagggtgcgatccagcgtgccatccgcgcgactgcggattgggct
gccctgcccaccgatgtctacctgcaaggtgaggcggtgatgcggctcgagactcgggtg
ccgttccaggggtggcggatgatgtcctacaccacctatgattcgatccgcgaacaggtc
aacgcggtgattgcgctcgaaatcatggggtttgcgatcctgcttgcgttggcgttttac
gcgttgagccgcaagacggcgctgcggatggcgctgtttcagcgcgagtcggcggagctt
cgcgtgttgaatgcgcgcctgcagcgggaaattgccgagcgtgaacgggtgcaaaagacc
ctcgctgtggctgaacaaagccttgcgcagagctccaaactggccgcgctcggagagatg
tctgccgccgtgagccatgagctcaaccagccgctggcggcgatgaaaacctacctcgcg
ggtgcgcgcctgctcctgcaacgtaaccgccccgacgaggcgctgtcgtcttttgggcgc
atcgacgacctcattgaacgcatgggggcgatcacgcggcagctgaaatcctatgcgcgc
aagggtggagacgcgttcagcccagtaaacatgggcgatgcgctcgcctcttcgctgtcg
atgatggagccgcaactgcgccagcgccacgtccagatcacccgtatcctgccggatgag
ccggtctttgtgatggcggatcggatgcgactggagcaggttatggtgaacctcttgcgc
aatgcgctggatgccaccaaatctgttgaggaacccgaggttgagatcatcctggccgcc
ggtgaaactgcgaccctcacggtccgcgacaatggcgacggcattcaggatttcgacagc
ctgttcgagccgttttacaccaccaagcaaccgggtgacggtgtcggacttgggcttgct
atctcctcggggatcgtgaacgacctaggcggtcgcctcacggcccgcaattccgatgcg
ggcggcgcggtgtttgaaatgcaactgccgatcctgatggacggcatcgaggccgccgaa
tag
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