KEGG   Ruegeria sp. TM1040: TM1040_1514
Entry
TM1040_1514       CDS       T00359                                 
Name
(GenBank) ABC transporter related
  KO
K01995  branched-chain amino acid transport system ATP-binding protein
Organism
sit  Ruegeria sp. TM1040
Pathway
sit02010  ABC transporters
sit02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sit00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    TM1040_1514
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TM1040_1514
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sit02000]
    TM1040_1514
Transporters [BR:sit02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    TM1040_1514
SSDB
Motif
Pfam: ABC_tran AAA_21 BCA_ABC_TP_C AAA_29 AAA_23 Dynamin_N AAA_27 RsgA_GTPase SMC_N MMR_HSR1 MukB AAA_15 AAA_30 nSTAND3 AAA_22 cobW AAA_10 AAA_14 HATPase_c_5 nSTAND_NTPase5 nSTAND1 AAA_28 AAA_16 ATPase_2 DUF87
Other DBs
NCBI-ProteinID: ABF64247
RoseoBase: TM1040_1514
LinkDB
Position
1621211..1621966
AA seq 251 aa
MSILEVKNVGKRFGGLQALSDVNLSVKENSVHAIIGPNGAGKSTLLNCLVGKLIPDTGSV
MFDGQSVLGRAPYEINQMGISRVFQTPEIFGDLTVLENMMIPCLAKRDGAFELNAIAAVM
SQRDILDRAEAMLVEMNMADKRHMHAASLSRGDKRRLEIGMCLSQEPRLLLLDEPTAGMA
RADTNNTIDLLKQISDERDITIAIIEHDMHVVFSLANRITVLAQGTPLVEDDPQNIRGNP
KVREAYLGETA
NT seq 756 nt   +upstreamnt  +downstreamnt
atgagcattctcgaagtcaaaaacgtcggcaaacgctttggtggcctccaggcgctgtcg
gatgtgaacctctccgtcaaggagaactcggtccacgccatcatcggccccaatggggcc
ggcaaatccaccctgctgaactgtcttgtcggcaagctgatccccgacaccgggtcagtg
atgttcgacggccagtcggtgctcgggcgcgcgccctatgagatcaaccagatgggcatc
agccgcgtctttcaaacgcctgaaatctttggagatctgacggttcttgaaaacatgatg
atcccctgcctggcgaaacgggacggcgcgtttgagctgaatgccattgccgcagtgatg
tcgcagcgcgacattctggaccgtgccgaagcgatgctggtggagatgaatatggccgac
aaacgccatatgcacgcggcctcgctctcgcgtggggacaaacggcggctggagatcggc
atgtgtctcagtcaggagccacggctgctcctgttggatgagcccaccgccggtatggcg
cgggccgacaccaacaacaccatcgacctgttgaaacagatctcggacgagcgcgacatc
accatcgccatcatcgaacacgacatgcatgtggtgttctcgcttgccaatcggatcacc
gttctggcgcagggcacccccctcgtggaggacgatccgcaaaacatccggggcaacccg
aaggtgcgcgaagcctacctcggcgagaccgcgtaa

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