Ruegeria sp. TM1040: TM1040_1562 Help Entry TM1040_1562       CDS       T00359                                  Name (GenBank) 3-hydroxyacyl-CoA dehydrogenase   KO K01782   3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Organism sit  Ruegeria sp. TM1040 Pathway sit00071   Fatty acid degradation sit00280   Valine, leucine and isoleucine degradation sit00310   Lysine degradation sit00362   Benzoate degradation sit00380   Tryptophan metabolism sit00410   beta-Alanine metabolism sit00640   Propanoate metabolism sit00650   Butanoate metabolism sit00907   Pinene, camphor and geraniol degradation sit00930   Caprolactam degradation sit01100   Metabolic pathways sit01110   Biosynthesis of secondary metabolites sit01120   Microbial metabolism in diverse environments sit01200   Carbon metabolism sit01212   Fatty acid metabolism Module sit_M00087   beta-Oxidation Brite KEGG Orthology (KO) [BR:sit00001]  09100 Metabolism   09101 Carbohydrate metabolism    00640 Propanoate metabolism     TM1040_1562    00650 Butanoate metabolism     TM1040_1562   09103 Lipid metabolism    00071 Fatty acid degradation     TM1040_1562   09105 Amino acid metabolism    00280 Valine, leucine and isoleucine degradation     TM1040_1562    00310 Lysine degradation     TM1040_1562    00380 Tryptophan metabolism     TM1040_1562   09106 Metabolism of other amino acids    00410 beta-Alanine metabolism     TM1040_1562   09109 Metabolism of terpenoids and polyketides    00907 Pinene, camphor and geraniol degradation     TM1040_1562   09111 Xenobiotics biodegradation and metabolism    00362 Benzoate degradation     TM1040_1562    00930 Caprolactam degradation     TM1040_1562 Enzymes [BR:sit01000]  1. Oxidoreductases   1.1  Acting on the CH-OH group of donors    1.1.1  With NAD+ or NADP+ as acceptor     1.1.1.35  3-hydroxyacyl-CoA dehydrogenase      TM1040_1562  4. Lyases   4.2  Carbon-oxygen lyases    4.2.1  Hydro-lyases     4.2.1.17  enoyl-CoA hydratase      TM1040_1562  5. Isomerases   5.1  Racemases and epimerases    5.1.2  Acting on hydroxy acids and derivatives     5.1.2.3  3-hydroxybutyryl-CoA epimerase      TM1040_1562 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  3HCDH_N 3HCDH ECH_1 ECH_2 NAD_binding_2 DAO F420_oxidored NAD_Gly3P_dh_N UDPG_MGDP_dh_N 2-Hacid_dh_C Pyr_redox_2 Sacchrp_dh_NADP ApbA RS_preATP-grasp-like NAD_binding_8 AlaDh_PNT_C FAD_binding_3 Shikimate_DH Motif Other DBs NCBI-ProteinID:  ABF64295 RoseoBase:  TM1040_1562 UniProt:  Q1GGC1 LinkDB All DBs Position 1667347..1669548 Genome browser AA seq 733 aa AA seqDB search MTDFKYDVDADGIAIITWDAEGKSMNVLTREAFGLVEDYIDRALGDDAVKGVVITSGKKD FAGGMDLNVLATIREESGENPAQGLFDFTMNGHRILRKLERAGMDAKNNKGGKPIACAIN GTCAGIGTEIALACHYRTMTDNPKAKIGLPEILLGIFPGGGGTIRYSRMVGAVNAAPVLL EGKMMDPKKAKSASLVDEVAADPLEAARQWVLNAKDADIVKPWDQKGYKMPGGAPYHPAG FMNFVGASAMVHGKTQGAFPAAKALLSAVYEGALVDFDTALRIEARWFTHVLMNPSSSAM IRSLFLNKQALEKGAVRPKGIEDQSVKKIGVLGAGMMGAGIALVSAQAGMEVVLIDRDQD AADKGKAYSATYMDKGIKRGKATPEKKEALLAQITATADLDALKGCDLIIEAVFEDPGVK AEMTKKVEAIIPEDCIFASNTSTLPITSLAEASVRPEQFIGIHFFSPVEKMFLVEIIKGE KTGDRAVAKALDYVRQIRKTPIVVNDARFFYCNRCIIPYINEGARMITEGVSPVLIDNAA RQLGFPVGPIQLTDETSIDLGAKIARATKAAMGDAYPESPADDLIFWMEDQGRLGRKANA GFFDYDDKGKRVEYWKGLAEKYPLAEVQPDLVEVQERLMFAQVLEAVRALEENVLMDIRE GDVGAVLAWGFAPWSGGPLSWLDIIGTPYAAERCDQLAEAYGDRFACPPLLREMAEKGQT FYGRFAPEEDQAA NT seq 2202 nt NT seq  +upstreamnt  +downstreamnt atgaccgatttcaaatacgacgtagacgccgatggcatcgccatcatcacatgggacgcg gaaggcaagagcatgaacgtcctcacccgcgaggcctttggcctggtggaggactatatc gaccgtgcgcttggcgatgacgccgtcaaaggcgtggtgatcacttccggcaagaaagac tttgcgggcggcatggacctgaatgtgttggccaccatccgcgaggaatccggtgaaaac ccggctcagggcctgtttgattttacgatgaatggccaccgcatcctgcgcaagctggag cgcgcagggatggacgccaagaacaacaagggcggcaagccgattgcctgcgccatcaat ggcacctgtgcaggcatcggcaccgagatcgcgctggcctgtcattaccgaaccatgacc gacaacccaaaggccaagatcggcctgccggagatcctgctgggcatcttccccggtggc ggcggtaccatccgctattcgcgcatggtgggtgccgtgaacgccgcccccgtgctgctt gaaggcaagatgatggaccccaagaaggcgaaatccgcgagccttgtggatgaggttgcc gccgatccgctggaagcggcgcgtcagtgggtgctcaacgccaaagacgccgatatcgtg aagccctgggatcagaagggctacaaaatgcccggtggtgcgccctatcacccggcgggg ttcatgaactttgtcggcgcgtctgccatggtgcatggcaagacccaaggcgccttcccg gcggccaaggcgctgctctcggcggtctatgagggcgcattggtggattttgacaccgcg ctgcgcatcgaggcgcgctggttcacccatgttctgatgaacccgtcgtcctctgcgatg atccgctcgctgttcctcaacaagcaagcgctggagaaaggcgccgtgcggcccaagggc attgaggatcagtccgtgaagaagatcggcgtgctcggcgcaggcatgatgggcgcaggc attgcactggtttcagcgcaggcgggcatggaggtcgtactgatcgaccgcgatcaggac gccgccgacaaaggcaaggcctactctgccacctatatggacaagggcatcaagcgcggc aaagccacgccggagaaaaaagaggcgctgctggcgcagatcaccgcaacagcagatctc gacgccctcaaaggctgcgatctcatcattgaggcggtgtttgaagacccgggcgtcaag gccgagatgaccaagaaggtcgaggcgatcatccccgaggattgcatctttgcctccaac acctcgaccctgccgatcaccagcctggccgaggcctcggtccggcccgagcagttcatc ggcattcacttcttctctccggttgagaagatgttcctggtggagatcatcaagggtgag aaaaccggcgatcgcgcggtggccaaggcgctggactatgtacgccagatccgcaagacg ccgatcgtggtcaatgatgcgcgcttcttctactgcaaccgctgcatcatcccctacatc aacgagggcgcaaggatgatcaccgaaggtgtctcgccggtgctgatcgacaacgccgcg cgccagcttggcttcccggtggggccgatccagctgacggatgagacctcgatcgatctc ggtgcaaagatcgcacgcgccaccaaggcggcgatgggcgacgcctatcccgaaagcccg gcggacgatctgatcttctggatggaagatcaggggcgtctggggcgcaaggccaatgcg ggcttctttgactatgacgacaagggcaagcgcgttgagtactggaaggggcttgcggag aaatacccgctggcggaggttcagcccgatctggttgaggtccaggagcggctgatgttt gcgcaggtccttgaggctgtgcgggcactggaggaaaacgtgctgatggacatccgcgag ggtgacgtgggcgcggttctcgcctggggctttgcgccgtggtccggtggaccgctcagc tggcttgacatcatcggcacgccctatgcagccgagcgttgtgaccaactggccgaggca tacggcgaccgttttgcctgcccgccgctcctgcgggagatggccgaaaaaggccagacc ttctatggccggtttgcgccggaagaggatcaagccgcctaa

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