Ruegeria sp. TM1040: TM1040_1694
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Entry
TM1040_1694 CDS
T00359
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sit03000
]
TM1040_1694
03036 Chromosome and associated proteins [BR:
sit03036
]
TM1040_1694
Transcription factors [BR:
sit03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
TM1040_1694
Chromosome and associated proteins [BR:
sit03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
TM1040_1694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
MarR
MarR_2
HTH_IclR
HTH_5
HVO_A0114
HTH_36
HxlR
HTH_20
DUF7343
HTH_Tnp_ISL3
HTH_CodY
HTH_41
LexA_DNA_bind
HTH_Crp_2
HTH_10
TrmB
AsnC_trans_reg_3
NirdL-like_HTH
GntR
HTH_11
EAP30
Motif
Other DBs
NCBI-ProteinID:
ABF64427
RoseoBase:
TM1040_1694
LinkDB
All DBs
Position
complement(1789014..1789490)
Genome browser
AA seq
158 aa
AA seq
DB search
MQSRFPGLDRFDQAILRELSHNGRTSISDLARAIGLSKSPTQARLKRLESEGIIQGYRAM
IDPIRLGLDHVAFVEVKLTDTREAALASFNAAVVQVAEIEEVHMLASHFDYLLKVRCRSM
SDFRAILGEKISSLPHVSSTSTYMSMQSVKDDAGLGPI
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgcgtttcccggggctggaccggttcgatcaggcgattctgcgcgagttgagc
cacaatggccgcacctccatttccgacctcgcccgtgccattggtctctcaaaatcgcca
acacaggcgcggctcaagcgcctggagtccgagggcatcattcagggctaccgggcgatg
atcgatccgatccgacttgggctggatcatgtggcctttgtcgaggtgaagctcaccgac
acccgcgaggcggcgctggcgtcgttcaatgccgcagtggtgcaggtggccgagatcgag
gaggtgcacatgttggcctcgcatttcgactacctgctcaaggtgcgctgccgctcgatg
tcggattttcgtgcgattctgggggagaaaatctcttcgctaccgcatgtttcctccacc
tcgacttatatgtcgatgcagtcggtcaaggatgatgcagggctggggccgatctag
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