KEGG   Ruegeria sp. TM1040: TM1040_1740
Entry
TM1040_1740       CDS       T00359                                 
Name
(GenBank) DNA topoisomerase IV B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sit  Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:sit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sit03032]
    TM1040_1740
   03036 Chromosome and associated proteins [BR:sit03036]
    TM1040_1740
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sit02048]
    TM1040_1740
Enzymes [BR:sit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     TM1040_1740
DNA replication proteins [BR:sit03032]
 Prokaryotic type
  DNA Topoisomerases
   TM1040_1740
Chromosome and associated proteins [BR:sit03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    TM1040_1740
Prokaryotic defense system [BR:sit02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    TM1040_1740
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: ABF64473
RoseoBase: TM1040_1740
UniProt: Q1GFU3
LinkDB
Position
1834669..1836678
AA seq 669 aa
MRHNEIKPHQRMSSDPHMADDLLSPSSSDTYDASSIEVLEGLEPVRQRPGMYIGGTDERA
LHHMVAEILDNSMDEAVAGHANRIEVELHADYSLTVRDNGRGIPIDPHPKFPDKSALEVI
LCTLHAGGKFSGKAYQTSGGLHGVGSSVVNALSDSLVVQVAKNKELFEQRFSRGKPLGGV
EKIGAAPNRRGTTVTFHADEQIFGSHRFKPARLFKLVRSKAYLFSGVEIRWKSAIDDGET
PQEATFHFPGGLRDYLTEVLGKSSVYADAPFAGKVEFREKFGEPGYVEWAINWTPSRDGF
TQSYCNTVPTPEGGTHVAGFWSAILKGIKAYGELVGNKKAGQITRDDLMAGGCALVSCFI
ADPAFVGQTKDRLSTEAAAKMVENSVRDHFDNWLAADTKSAGAILDFLILRAEERLRRRQ
EKETARKSATKKLRLPGKLTDCTSKDRSGTELFIVEGDSAGGSGKGARNREYQALLPLKG
KILNVLGAASGKLTSNAEIRDLCEALGVGLGTKFNLDDLRYDKIIIMTDADVDGAHIASL
LMTFFFTQMRPLIDGGHLYLACPPLFRLTQGAKRVYCLDEAERDMWMEKGLGGKGKIDVS
RFKGLGEMDAKDLKETTMDPKTRKLIRVTIDEDEPGETSDLVERLMGKKPELRFQYIQEN
AKFVEELDV
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgcgccataatgagatcaaaccacatcaaagaatgagcagcgatccgcacatggcagat
gaccttctgagcccctcttcgtctgacacctatgacgcctcctcgatcgaggttctcgag
ggcctcgaaccggtgcgtcagcgccccggcatgtatatcggtggcacggatgagcgcgcg
ttgcatcacatggtggccgagatcctcgacaactccatggacgaggcggtcgcgggtcat
gccaaccgcatcgaggtggagctgcacgcggattattcgctgaccgtgcgcgacaacggg
cgcggcattccaattgatccgcacccgaagtttcccgacaaatccgcgctggaggtgatc
ctctgtacgctgcacgcaggcggcaagttctcgggcaaggcctaccagacatcgggcggc
ctgcacggggttggctcttcggttgtaaacgcgctctcggattcgctggtggttcaggtg
gccaagaacaaggaattgttcgaacagcggttttcgcgcggcaagcccttgggcggtgtg
gaaaaaatcggcgctgcccccaatcggcgcggcaccacggtgacatttcacgctgatgag
cagatctttggctcgcaccggttcaaaccggcgcgcctgttcaagctcgtgcgctccaag
gcctatcttttttcgggcgtcgagatccgttggaaatccgccattgatgacggagagacc
ccacaggaagcgacattccatttccctggtggtctgcgcgattacctcaccgaagtgctg
ggcaaatcctcggtttatgccgatgccccctttgcaggcaaagtcgagtttcgcgagaag
ttcggcgagccgggttatgtggaatgggcgatcaactggacgccctcgcgcgacgggttc
acccagtcttattgtaacaccgtccccaccccggaaggcggcacccatgtcgcggggttc
tggtccgcgatcctcaaggggatcaaggcctatggcgagctggtcggcaacaagaaggca
ggccagatcacccgcgacgacctgatggcgggtggctgtgcgctggtctcttgttttatc
gctgacccggcgtttgtgggccagaccaaggaccgcctgtcgaccgaagccgcggccaag
atggttgaaaactcggtgcgcgaccatttcgacaactggcttgcggccgatacaaaatcc
gcgggcgccatccttgatttcctgatcctgcgcgccgaggaacgtctgcgccgcagacag
gaaaaggaaaccgcccgtaaatccgccaccaagaaactgcgcctgccgggcaagctcacg
gattgtacatccaaggatcgctcgggcaccgaactgttcatcgtcgagggggactcggcc
ggtggctccggcaaaggcgcgcgcaaccgcgagtatcaggcgctcctgccgctcaagggc
aagatcctgaacgtgctcggtgcggcctcgggcaagcttacctcgaacgccgagatccga
gatctctgcgaagcgctgggggtggggctaggaaccaagttcaaccttgatgacctgcgc
tatgacaagatcatcatcatgaccgatgcggatgtggacggtgcacatatcgcgtcgctt
ctgatgacctttttctttacccagatgcggccgctgattgacggtggccatctctatctc
gcctgcccgcccctgttccgcctcacccagggggccaagcgcgtctactgcctcgacgag
gccgagcgcgacatgtggatggaaaaaggtctgggcggcaaaggcaagatcgacgtgtcg
cgcttcaagggtcttggtgaaatggatgccaaggacctgaaggaaaccacgatggatccc
aagacccgcaagctgatccgcgtcaccatcgacgaggacgagcccggcgagactagcgac
cttgtggaacgcctgatgggcaaaaagcccgagctgcgattccagtacatccaggagaac
gccaagttcgtcgaggaactggacgtttaa

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