Ruegeria sp. TM1040: TM1040_1778
Help
Entry
TM1040_1778 CDS
T00359
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TM1040_1778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sit03032
]
TM1040_1778
Enzymes [BR:
sit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TM1040_1778
DNA replication proteins [BR:
sit03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TM1040_1778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
AAA
ATPase
nSTAND3
Styelin
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABF64511
RoseoBase:
TM1040_1778
LinkDB
All DBs
Position
1871573..1873090
Genome browser
AA seq
505 aa
AA seq
DB search
MNEITSFNGDPQPPASPDARGAADEAQATELPHSVEAEQQLLGAILTNNDVYDKVASIIN
SSHFYDPVHARIYEVAAARISKNALASPVTLKAFMEDDQGLKELGGPAYLAKLASASISA
FAVRDYAQMIYDLAIRRELIALGQTIAEKARRVDVASEPKEQIVEAEQSLYQLAEQGQTE
QGFKSFLRAVTEAVNVTNEAYQRGGGMAGISTGLDDLDKQLGGLHPSDLLILAGRPSMGK
TSLATNIAFNVAKAYRRGLKQDGSEGAIDGGVVGFFSLEMSAEQLAGRILAEASEISSHK
IRQGDMTEEEFRRFVQAAKDLESCPLFIDDTPAIPISQLAARARRLKRTHGLDLLVIDYL
QLCRGMSDNRVNEIAEISMGMKAIAKELNIPVIALSQLSRQVESREDKRPQLSDLRESGS
IEQDADVVMFVFREEYYKEREKPGDHELDKMEEWKQAMERLHAKAEVIVGKQRHGPIGTV
ELSFEAQFTRFGNLAKAWQQQPDGY
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagatcacctctttcaacggcgatccacagccgccagcgtcaccggacgcgcgc
ggtgcggcagatgaagcgcaggcaacagaattgccccattccgtcgaggcggaacagcaa
ctgctgggggcaattctcaccaacaatgacgtctatgacaaagtcgcctcgatcataaat
tcctcgcatttctacgacccggtccacgcccggatctacgaggtggccgcggcccggatc
tccaagaacgcgctggcttcgccagtgacgctcaaggccttcatggaggatgatcagggc
ctcaaagaattgggcggccccgcctatctcgccaagctggcctcggcgtcgatctccgcc
tttgcggtgcgcgactatgcacagatgatttatgatctggcgatccggcgcgaactcatc
gcgcttggccagaccatcgcggaaaaagcccgccgcgtcgatgtcgcctccgaacccaag
gaacagatcgtcgaggccgaacagtcgctctaccagctggccgaacagggccagaccgaa
caggggttcaaatccttcctgcgcgctgtcaccgaggccgtgaatgtcaccaatgaggcc
taccagcgcggcggcggcatggccgggatctctaccgggctggatgatctcgacaaacag
ctggggggcttgcacccttcggacctgctgatcctcgccggacgcccctcgatggggaaa
acctcgcttgccaccaacatcgccttcaacgtcgccaaagcctatcggcgcggtctgaaa
caggacggcagcgaaggggccattgacggcggcgttgtgggcttcttctcgctcgagatg
tccgccgaacagctggcaggccggatcctggccgaagcgtcagagatctcctcgcacaag
atccgccagggtgacatgaccgaagaagagttccgccggttcgtccaagccgccaaggat
ctggaaagctgcccgctctttatcgacgatacgcccgcgatcccgatctcacagctggcc
gcccgcgcccgccgcctgaaacggacccatgggctcgaccttctggtgatcgactacctg
cagctctgccgcggcatgtccgacaaccgcgtgaacgagattgccgagatctcgatgggc
atgaaagccatcgccaaggaactcaacatccccgtcatcgccctgtcgcagctctcccgt
caggtcgaaagccgcgaggacaaacgcccgcagctctccgacctgcgggaatcgggctcg
atcgaacaggacgccgacgtggtcatgttcgtgttccgcgaagaatactacaaagaacgc
gaaaaaccgggcgaccacgagctcgacaagatggaagagtggaaacaggcgatggaacgc
ttgcacgcgaaggccgaagtcatcgtcggcaaacagcgtcacggccccattggcacggtc
gaactttcgttcgaggcgcagttcacgcgctttggcaacctcgccaaagcctggcagcag
caacccgacggctattaa
DBGET
integrated database retrieval system
