Ruegeria sp. TM1040: TM1040_1784
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Entry
TM1040_1784 CDS
T00359
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sit03400
]
TM1040_1784
DNA repair and recombination proteins [BR:
sit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TM1040_1784
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
AAA_16
AAA
Lon_C
SLFN-g3_helicase
nSTAND3
AAA_30
AAA_24
NTPase_1
KdpD
MeaB
MCM
AAA_14
DUF815
AAA_5
NACHT
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ABF64517
RoseoBase:
TM1040_1784
UniProt:
Q1GFP9
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All DBs
Position
1877394..1878758
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AA seq
454 aa
AA seq
DB search
MAKTTFSCSACGASYSKWSGRCEGCGEWNTISEDKGLSSGGPAKKSLGAMRGKRLALSDL
ATQETPPPRTLCGVAELDRVLGGGLVDASAILVGGDPGIGKSTLLLQAAAQFAHAGLKTV
YVSGEEASAQVRMRAQRLGLAQAPVKLAAETNLRDILTTLEAEKPQLAIIDSIQTMWADN
VDSAPGSVSQVRAAAHELTTFAKTNGVSIIMVGHVTKEGQIAGPRVVEHMVDTVLYFEGE
RGHQFRILRAVKNRFGPADEIGVFEMTGGGLAQVVNPSALFLSERGQPSPGSVVFAGIEG
TRPVLVEMQALVAPSPHSQPRRAVVGWDSSRLAMILAVLEARCGIPFAGLDVYLNVAGGM
KISEPAADLAVAAALLSAREDTALPADTAIFGEISLSGALRPAPQTENRLKEAQKLGFTA
AIAPSGGKTVSVPGLTLRPAADLTGFVGEYFGAG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacaacattctcctgctccgcctgcggggcctcctattccaaatggtccggt
cgctgcgagggctgcggtgagtggaatacgatttccgaagacaaggggctgagctctgga
ggaccggccaagaagtcccttggcgcaatgcgcggcaaacgactggcgctgagcgatctg
gccacgcaagagacgcctcctccgcgcaccctttgtggtgtggcagagcttgatcgcgtc
cttggaggcggcctggtcgatgcgtcggccatcctcgtggggggcgatcccgggatcggt
aaatccacgctgctgttgcaagctgcggcgcaatttgcacacgcaggcctgaagacggtc
tatgtttcgggagaggaagcctcggcgcaggtacggatgcgcgcccagcgtctgggactg
gcacaagcccctgtcaagctcgcggcggaaaccaacctgcgcgatattctcaccacgctt
gaggcggaaaaaccccagctggccattatcgattcgatccagaccatgtgggccgacaat
gtggacagtgcgccgggatccgtcagtcaggtgcgcgcggcggcccatgagctgaccact
tttgccaagaccaatggtgtcagcatcatcatggtgggccatgtcaccaaggaaggccag
atcgccgggcctcgcgtggtcgaacatatggtcgacacggtcttgtatttcgagggcgag
cgcggccaccagttccgcatcctgcgtgccgtgaagaaccgctttggccctgccgacgag
attggcgtctttgagatgaccggcggcgggctggcgcaagtggtgaacccttcggccctg
tttctgtccgaacgcggccagccctcgcccggatcggtggtctttgccggtatcgaaggc
acccgtccggtcctcgtggaaatgcaggcgctggtggcgccttcgccccattcgcagccc
cgccgcgctgtggtgggctgggacagctcgcgccttgcgatgatcctcgccgttctggag
gcgcgctgtggcattccttttgccgggcttgatgtctatctcaatgttgcgggcggcatg
aaaatctctgaacccgcggccgacctggcggtggcggccgccctccttagtgcacgcgag
gacaccgccctgcccgccgatacggcaatatttggcgaaatatccctatctggcgcgctc
agaccggcccctcagaccgaaaaccggttgaaagaggcgcaaaaacttggtttcacggca
gcgatcgctccgagcggtggcaaaactgtttctgtccccggcctgaccctgcgcccggcc
gccgacctcacaggatttgttggcgaatatttcggagcaggctaa
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