Ruegeria sp. TM1040: TM1040_1828
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Entry
TM1040_1828 CDS
T00359
Name
(GenBank) ABC transporter ATP-binding/permease protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_1828
Transporters [BR:
sit02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
TM1040_1828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_30
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_29
DEAD
HUTI_composite_bact
AAA_23
ATP-synt_ab
TsaE
AAA_15
AAA_7
7tm_7
Motif
Other DBs
NCBI-ProteinID:
ABF64561
RoseoBase:
TM1040_1828
UniProt:
Q1GFK5
LinkDB
All DBs
Position
complement(1923997..1925799)
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AA seq
600 aa
AA seq
DB search
MARGAVQNTASNEERETSRRIGVLKALWPFMRPYRGLIFAALAALTLTAGVSLSLPLAVR
RVVDNFRITDAALLNQYFTAAMIMAALLALGTGIRYALVTKLGERVVADIRKAVFDRIIG
MSPAFFERIMTGEVLSRITTDTTLIQSVLGSSASIALRNLLIFLGGLVLMLLTSAKLTAM
VLLIVPAVIVPILFLGRRLRVISRENQDWIAASSGNAGESLGAVQTVQAFTHEDLSRAHF
SEMTETSYEVSKRRIQTRALLTVIVIFLVFSGVVGVLWIGANDVRFGSMSEGALVQFVIY
AVMVAGSVAALSEIWSELQRAAGATERLVELLQAEDSVRDPEVAQVLPEPVRGELTFDTV
SFTYPSRPDVSALDQVSLTIAPGETVAFVGPSGAGKTTIIQMIQRFYDPQSGEVRLDGVP
LQALARDDFRRHIALVPQDPVIFAATARDNIRFGRPDASDAEVEAAAKAAAAHDFIMKLP
EGYDAYVGERGVMLSGGQKQRIAIARAILRDAPVLLLDEATSALDAESERLVQAAFEDLS
RDRTTIVVAHRLATVKKADRIVVMDQGRIVAVGTHESLVAEGGLYARLARLQFTDGQAQG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaggtgcagtgcagaatacggccagcaacgaggaacgcgagacctcgcgcagg
atcggagtcctgaaggcgctttggccgttcatgcgtccgtatcgtggcttgatctttgcc
gcgctggctgcgctcaccctgacggcaggcgtgtcgctgtcgctgccgctggcggtgcgc
cgggtggtggacaacttccgcatcaccgatgccgcattgctgaaccagtattttacggct
gcgatgatcatggcggcgctgctcgcgctgggcacggggatacgctatgcgctggtgacc
aagctgggcgagcgggtggtggccgatatccgcaaggcggtgtttgaccgcatcatcggc
atgagccccgcgtttttcgagcgtatcatgacgggcgaggtgctgagccggatcaccacc
gataccacgctcattcagtcggtgcttgggtcttctgcatccattgcgctgcgcaacctg
ttgattttcctcggtggtctggtgctgatgctgctcacctcggccaagctcacggcgatg
gttctgctgatcgtgccggcggtgatcgtgccgatcctgtttctggggcggcgtctgcgg
gtgatctcgcgggagaaccaggactggatcgcggcctcgtcggggaatgcgggcgagtcg
ctgggcgcggtgcagaccgtgcaggcctttacccatgaggacctgagccgggcgcatttt
tccgagatgacagaaacctcctatgaggtctccaagcggcgcatccagacccgcgcattg
ctgacggtgatcgtgatctttctggtgttttcgggcgttgttggcgtcttgtggatcggg
gccaacgacgtgcgctttggctccatgagcgaaggcgctctggtgcagttcgtgatctat
gccgtgatggtggcgggctccgtggcggcgctctcggagatctggagcgagttgcagcgt
gccgcaggcgcgacggagcggctggtggagctgttgcaggccgaggacagcgtgcgcgac
cctgaggtggcgcaggtgctgccagagcctgtgcgcggtgagctgacttttgacaccgtg
tccttcacctatccctcgcggccggacgtctcggcgctggatcaggtgagcctcaccatc
gcgccgggcgagaccgtggcctttgtcggcccgtcgggggcgggcaagaccacgatcatt
cagatgatccagcggttctacgatccgcaatcgggcgaggtgcgtctggacggtgtgccg
ctgcaggcgctggcgcgcgatgatttccgccgccacatcgcgctggtgccgcaagatccg
gtgatctttgctgccaccgcgcgcgacaatatccgttttggccgtcccgatgcgagcgac
gccgaggtcgaggccgccgccaaggccgctgccgcgcatgacttcatcatgaagctgccc
gaaggctatgatgcctatgtgggcgagcgcggggtgatgctgtcgggcgggcagaaacag
cgcattgcgattgcgcgggcgatcctgcgcgacgcgcctgtgctgcttctggatgaggcg
acctcggcgctggatgccgagagcgagcgtctggtgcaggccgcgtttgaggacctgagc
cgggatcgcaccaccattgtggtggcgcaccgtctggcgacggtcaaaaaggccgaccgg
atcgtggtgatggatcagggccgcattgttgcggtgggcacccatgagagcctggtggcc
gagggcgggctttatgcgcgcctcgcgcggctgcagttcaccgacgggcaggcgcagggg
taa
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