Ruegeria sp. TM1040: TM1040_1852
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Entry
TM1040_1852 CDS
T00359
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TM1040_1852
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sit01007
]
TM1040_1852
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sit03016
]
TM1040_1852
Enzymes [BR:
sit01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
TM1040_1852
Amino acid related enzymes [BR:
sit01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
TM1040_1852
Transfer RNA biogenesis [BR:
sit03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TM1040_1852
Prokaryotic type
TM1040_1852
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
ABF64585
RoseoBase:
TM1040_1852
UniProt:
Q1GFI1
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All DBs
Position
complement(1952289..1953644)
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AA seq
451 aa
AA seq
DB search
MRLSRYFLPVLKETPSEAQVVSHRYMLRAGMIKQSAAGIYSWLPLGYRVLKKIEGIVHEE
QMRAGHIPMLMPTIQSADLWRESGRYDAYGEEMLRIRDRHDRDMLFTPTAEELITDIFRA
NVSSYKDLPLTMYQIQWKFRDEIRPRFGVMRGREFYMKDGYNFDLTKEDALHAYNRHLVT
YLRTYERMGLQAIPMRADGGPIGGDYTHEFLVLAETGESEVFYDSEITDLTFGAREIDYD
NVEQCQAVLEEFTSRYARTDETHDEALFNAVPEERRRVARGIEVGQIFYFGTKYSEALGA
TVQTADGQSVPVHMGSHGIGVSRLLGAIIEASHDDKGIIWPEGVTPFHCGIVNLKQGDDE
ADAACEQLYAALTAIGLEPLYDDRKERAGGKFASMDLIGLPWRITVGPRGLKNGVVEVTS
RRTGESEEMSPEDAVKKIAAIYANHPTPRGF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgtctcgctattttctgcccgtcctcaaggagaccccctccgaggcgcaggtc
gtcagccaccgttacatgctgcgcgccggcatgatcaaacagtccgccgccgggatctat
tcctggctgcctctgggctaccgcgtgctgaaaaagatcgaaggcatcgttcacgaagag
cagatgcgcgccggtcacatcccgatgctgatgcccaccatccagtcggctgacctgtgg
cgcgagtccgggcgctatgacgcctacggcgaggagatgctgcgcatccgcgaccgccat
gaccgcgacatgctctttacgccaaccgccgaggaactcatcaccgacatcttccgcgcc
aatgtctcaagctacaaagacctgccgctgacgatgtatcagatccagtggaagttccgc
gacgagatccgcccgcgctttggcgtgatgcgggggcgcgaattctacatgaaggacggt
tacaacttcgacctcaccaaagaggacgcgctgcacgcctacaaccgccatctggtcacc
tacctgcgcacctatgagcgcatggggctacaggcgatcccgatgcgcgccgatggtggc
ccgattggtggcgactacacccacgaattcctcgtgctggctgaaaccggcgaatcggag
gtcttttatgacagcgagatcaccgatctgacgttcggcgcccgcgagatcgactatgac
aatgttgaacagtgtcaggcggtgctcgaagagttcacctcacgttacgcccgcaccgac
gagacccacgacgaggcgctgttcaacgcggtcccagaagagcgccgccgcgtcgcgcgc
gggatcgaggtcggccagatcttctacttcggcaccaaatactccgaggcgctgggcgcc
accgtgcagaccgccgatggccagagcgtgccggtccacatgggctcgcacgggattggt
gtgtcgcgtcttctcggcgccatcatcgaggccagccacgacgacaagggcatcatctgg
cccgaaggtgtgacccccttccactgcggcatcgtgaacctcaagcagggcgacgatgaa
gcggatgccgcctgcgagcagctctatgcggcgctcaccgccatcggtctggagccgctt
tatgatgatcgcaaggaacgtgcgggcggcaaattcgccagcatggatctcattggcctg
ccatggcgcatcaccgtcggcccgcgcggtctgaagaacggcgtcgtcgaagtgaccagc
cgccgtaccggcgaaagcgaagaaatgagcccggaagacgcggtaaagaaaatcgccgcg
atctacgccaaccaccccacgccgcgcggcttctga
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