Ruegeria sp. TM1040: TM1040_1927
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Entry
TM1040_1927 CDS
T00359
Name
(GenBank) Pseudouridine synthase Rsu
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sit03009
]
TM1040_1927
Enzymes [BR:
sit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
TM1040_1927
Ribosome biogenesis [BR:
sit03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TM1040_1927
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ABF64660
RoseoBase:
TM1040_1927
LinkDB
All DBs
Position
2026097..2027365
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AA seq
422 aa
AA seq
DB search
MLSPLSRIGYGSAMSKKTPSKPPARRAANAARPKATPSATPRAHKGLQAGAPADARPSQD
GDRIAKVLSRAGVASRREAERMIAEGRVAVNGKVIDSPALNVTNLDRIVVDGNPLPEAEA
PRLWLYYKPNGLVTTTSDEKGRKTIFDALPEDLPRVMTVGRLDLNSEGLLLLTNDGGVKR
QLELPSTGWLRRYRVRINGRPQDHEFDVLRKGVVIDGERFQPMTISLDRQQGANAWLTIG
LREGKNREIRRAMEEVGYPVNRLLRISYGPFQLGTLKEGEVEELRPRVVRDQLGLAAPEG
DGEAKKKPTRPGRGPRNPGAKTAGKGIGAPNARPTGKGAVKAPEGRVFSGKTFSGKTTGK
TAGKPAAHKGQGGKPSGPKSFGTKQGGGSGARGSGKPNGASGGASGGKFSPGGRRFGKKP
QD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgccgctctcgcgaataggctatggcagcgccatgagcaagaaaaccccatcc
aaaccgcccgcgcgccgcgccgccaacgctgcccggccaaaggccaccccctccgcgacg
ccgcgcgcacacaagggcctgcaggcaggcgcacccgcagacgcgcggccctcgcaagac
ggtgaccgcatcgccaaggtgctgtcgcgcgcaggcgtggcctctcgtcgcgaggcggaa
cggatgattgcggagggtcgcgttgcggtcaatggcaaggtcatcgacagccccgcgctc
aatgtgaccaatctggatcgcatcgtggtggatggcaatccgctgcccgaggccgaggcc
ccgcggctttggctctattacaagcccaacgggttggtcaccacgacctccgacgagaaa
gggcgcaagacgatctttgacgcattgcccgaggacctgccgcgggtgatgacagtgggc
cggcttgacctcaattccgaaggcctgctgctgctgaccaacgacggcggcgtcaaacgc
cagttggagctgccctcgacaggctggctacgccgctaccgcgtgcggatcaatggccgc
ccgcaggatcatgaatttgacgtgctgcgcaaaggcgtggtgatcgacggcgagcgtttt
cagccgatgaccatctcgctcgatcgccagcaaggcgccaacgcatggctcaccatcggg
ctgcgcgaaggcaagaaccgcgaaattcgccgcgccatggaagaggttggctatccggta
aaccggcttctgcggatctcttatgggccgttccagctcggcacgctcaaggaaggcgaa
gtagaggagttgcgcccacgcgtggtgcgggatcaactgggtctcgccgcacccgaaggg
gatggcgaagccaagaagaaacccacccgccccggacgcggcccgcgcaatcctggcgca
aagactgctggaaaaggcatcggcgcgcccaacgctcgcccgacaggtaaaggcgcagtc
aaagcccccgaaggcagagttttttctggcaagaccttctcgggcaaaaccaccggcaaa
accgctggcaaacctgcggctcataagggccagggcggcaaaccctcgggtcccaagagt
tttgggaccaaacagggcggcggctcgggcgcgcgaggatccggtaaacccaatggcgca
tccggtggggcatccggcggcaaattcagccccggcgggcgccgttttggcaaaaaaccg
caggactga
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