Ruegeria sp. TM1040: TM1040_1951
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Entry
TM1040_1951 CDS
T00359
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02020
Two-component system
sit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TM1040_1951
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM1040_1951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sit03000
]
TM1040_1951
Transcription factors [BR:
sit03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
TM1040_1951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR_2
Rrf2
HTH_24
PDE12-like_N
HemN_C
HTH_23
DUF3435
Motif
Other DBs
NCBI-ProteinID:
ABF64683
RoseoBase:
TM1040_1951
UniProt:
Q1GF83
LinkDB
All DBs
Position
2053848..2054516
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AA seq
222 aa
AA seq
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MAAAPLPASSFLSGASERLRAMLDSQATDVHLETGDVLFERGDEGDALYAIISGALEIST
LSAAGRKLSLDMMRPGAIFGEIAMFDPGERTATATAAEPSHLRRLRHRDVLAQLTKHPEL
AGDMLKLAGQRMRWMNTQLNEQVFLPMPVRLARKLLYLTPADGNGQLSLSQSELAEFVGA
TREAVSKTLSNWRKAGLIEISRGGLHLKDRGGLAVLADPEGI
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctcctctccctgcctccagctttctgtccggggcctcggagcgcctgcgg
gccatgctcgacagccaagccacagatgttcatctcgaaacgggcgatgtgctctttgag
cgcggcgacgagggcgacgcgctttatgcgatcatctctggcgctcttgagatctccacc
ctttccgcagcggggcgcaagctctcgcttgatatgatgcgcccgggggcgatctttggt
gagatcgcaatgttcgatcccggcgagcgcaccgccaccgccaccgccgctgaaccaagc
cacctgcgccgcctgcgtcacagggacgtgctggcgcagttgaccaagcatcccgaactt
gcgggtgatatgctgaagctcgcggggcagcgcatgcgctggatgaatacacaactcaat
gagcaagtgttcctccccatgccggtgcgtctggcgcgcaagctcctctatctcacgccc
gcggatggcaacggccagctgagcctctcgcaatcggaactggccgaattcgtcggcgcc
acccgcgaagcggtctcaaagaccctgtcgaactggcgcaaggcgggcctcatcgagatc
agccgcggaggactgcacctcaaagatcgcggcgggctggcggttctggccgaccccgaa
ggcatctaa
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