Ruegeria sp. TM1040: TM1040_2064
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Entry
TM1040_2064 CDS
T00359
Name
(GenBank) FAD dependent oxidoreductase
KO
K26064
D-lysine oxidase
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00310
Lysine degradation
sit01100
Metabolic pathways
sit01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
TM1040_2064
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GFIT
Motif
Pfam:
DAO
Pyr_redox
NAD_binding_8
FAD_binding_3
FAD_binding_2
Pyr_redox_2
ApbA
TrkA_N
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
Pyr_redox_3
Epimerase
AlaDh_PNT_C
HI0933_like
NAD_binding_7
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ABF64796
RoseoBase:
TM1040_2064
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Position
complement(2168043..2169287)
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AA seq
414 aa
AA seq
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MSEILVLGGGMVGISTALELQARGHAVTVVDRKAPGQETSYGNAGLIQAEAAEPYAMPRA
LPEILGILSGRSNDVIWSLRGVLSQLPALWQYYRYSHPHRHLALSQPNAHLIRTACADHD
RWITAAAAQDLIAQDGYLSVFQDAAMFDSLASDLERLRQSYGVEATAMSGPQLCKMEPLY
QRPPVGGIHWRDVWSCAAPGELVARYAALFQSRGGEICTGDASTLRPEGSAWALMSEAGR
LHGEHAVIALGPWTPPILAQLGYRVRMIMKHGAHRMYPTGPKLRRPVHDAQHGIVLSSMK
GGLRMTCGVALEASGRVPDARQLDRGAKGLAAYMDLGTAEGGPIWHGTRPFLPDMLPMVG
AAPRHDRLWFHFGHGHQGFTLGPTTARHLGALIDGGDSAGIAALLPQNRPAVLS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaattctggttcttggtggcggaatggtgggcatctcgacggcgctcgaactg
caggcgcgcgggcacgcggtcacggttgtggatcgcaaagcccccgggcaggagacaagc
tatggcaatgcggggctcattcaggccgaagcggccgagccctacgccatgccccgcgcg
ctgcccgagatccttggtattctgtctggacgcagcaacgacgtgatctggtccctgcgc
ggcgtgctaagccagctgcccgcgctctggcagtattatcgctactcgcatccgcaccgc
catctcgccctgtcgcagcccaacgcgcatctgatccgcaccgcctgcgccgatcatgat
cgttggatcaccgcggcggcggcacaggatctgatcgcgcaggatggctatctgtcggtc
tttcaggatgcggccatgtttgacagcctggcctctgatctcgagcggctgcgacaaagt
tatggcgtcgaggcaacggccatgagcgggccgcagctttgcaagatggagccgttgtat
cagcgcccacccgtagggggcatccattggcgcgacgtctggagctgcgccgcccccggc
gaactggtcgcgcgctatgccgcattgttccagagccggggcggagagatttgtaccggc
gatgccagcactttgcgcccggaggggtcggcctgggcgctcatgtcagaggccgggcgg
ctgcacggcgagcatgccgtgatcgcgctcgggccatggacgccgccgatattggcccaa
ctgggctaccgggtgcggatgatcatgaaacacggcgcgcatcgcatgtatcccacgggg
cccaagctgcgccgccccgtgcatgacgcccaacacggtattgtgctctcgagcatgaaa
gggggcttgcgcatgacctgtggcgtggcgctggaggcctctggccgggtgccggatgcg
cgccagctggatcgaggcgccaaaggtcttgccgcctatatggatctcggcactgccgag
ggcggaccgatctggcacggcacgcgtccgtttctgccggatatgctgccgatggtcggt
gccgccccacgccacgaccgcctgtggtttcattttgggcatgggcaccaggggttcacc
cttggccccaccaccgcacgtcaccttggcgcgctcatcgacggcggtgacagcgccggt
atcgcggcgctcctgccgcagaaccgaccggctgttttgtcctag
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