Ruegeria sp. TM1040: TM1040_2112
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Entry
TM1040_2112 CDS
T00359
Name
(GenBank) transcriptional regulator, IclR family
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sit03000
]
TM1040_2112
Transcription factors [BR:
sit03000
]
Prokaryotic type
Helix-turn-helix
IclR family
TM1040_2112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR_C
MarR_2
HTH_24
HTH_20
RP-C
HTH_9
MarR
Dimerisation
TrmB
HTH_26
Xre-like-HTH
HTH_27
GAF
TFIIE_alpha
HTH_5
HTH_DeoR
Rrf2
Cullin
HTH_53
Motif
Other DBs
NCBI-ProteinID:
ABF64844
RoseoBase:
TM1040_2112
UniProt:
Q1GES2
LinkDB
All DBs
Position
complement(2217033..2217839)
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AA seq
268 aa
AA seq
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MLKENRSLDRGIEILETLAREGAMSLADLHRATGLPKSTLRRLLQTLIARKIVRRSLADK
LYRTLVVFPDISGEVMPKGMLHISEAAIPRALALTKEIGWPSDIHIRETRAMRIIDNTRH
ASTFHVERGQINQRVSHFGSATGLACLAEMKDAEIATIYEAFKPDLQWGPVRFGLDLAGL
MARIEQVRQVGYAERLSAPMSDPDWDTDLRAIAVAIKARGRVVGGLSVLWLRPYKPVEEF
ARLHLEALQTAAAEINATLDAVWEDAAT
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagaaaatcgctctctggatcgtggtatcgaaattctggaaaccctcgcgcgc
gagggagcgatgtcgcttgcggatctgcaccgggcgacaggcctgcccaagagcacgctg
cgccgtcttttgcagaccttgattgcgcgcaagattgtgcgccgttcccttgcagacaag
ctctatcggaccttggttgtatttccagatatttcgggcgaggtcatgccaaaggggatg
ctgcatatctcagaggcggcgatcccgcgggcgcttgcgttgaccaaggagattggctgg
ccgtccgacatccatatccgcgaaacgcgtgcgatgcggatcatcgacaatacccgccac
gccagcacctttcacgtcgagcgcggccagatcaaccagcgtgtcagccattttggctcg
gccactgggctcgcctgtctggcagagatgaaagatgctgaaatcgctaccatctacgag
gccttcaagcccgatcttcagtggggtccggtgcgttttgggctggacctcgcggggctg
atggcgcggatcgaacaggtgcgccaagtgggctatgcggagcgcctctctgcgccgatg
agcgatccggattgggacaccgatttgcgcgccatcgccgtcgccatcaaggcccgtggg
cgcgtggtgggcggtctgtcggtgctctggctcaggccctacaaacctgtcgaagaattc
gctcgcctgcatcttgaggcactgcaaaccgcggccgccgagatcaacgccacgcttgat
gccgtgtgggaggacgctgcgacctga
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