Ruegeria sp. TM1040: TM1040_2167
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Entry
TM1040_2167 CDS
T00359
Name
(GenBank) transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sit03000
]
TM1040_2167
Transcription factors [BR:
sit03000
]
Prokaryotic type
Helix-turn-helix
GntR family
TM1040_2167
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ABF64899
RoseoBase:
TM1040_2167
LinkDB
All DBs
Position
complement(2277923..2279320)
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AA seq
465 aa
AA seq
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MPSDLPAFMPDRRSDVPIFEQICTALRSRIRSGALATGARLPATRALAGDLGVARATVVT
AYEQLVAEGYLMARRGSGYTVCAMGEVELPAKGTPTPPADLSERGDLLLEAGQPDMRLFP
HRAWAKAVARLCRTRPEDMLMGCGRFGHPDLRQAIAAHVNDWRGIAARPDQVLVTSGATE
ALDVCLAALASSTGAVGVEDPGYPPIRRFAQAQGRRIRDLALDSQGAEVPTTGDGTDVVV
LTPSHQYPLGGAMSAGRRQEFVRWAAQSQGWIIEDDYDSEFRYAGRPIPALAGVDGQGRT
VYIGSFSKIFSNSLRMGYIVAPEALVERLVRAMRRKGARASAMPQAALAEFMQHGEFYRH
LRRVRRIYAERHRTLIARLRSDFSDVGHVEDYQAGMQVVLHLRPEICDQTVTTAARAAGV
GAEALSSYSRRAGAFNGVVLGACLNDLDEQAEALSRLRATISSTG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcgatttgcccgcctttatgccggatcggcgttctgatgtgccgatctttgag
cagatctgcacggccttgcgatctcgaattcgctctggggctcttgccaccggggcgcgg
ctcccggcaacgcgggcgcttgcaggggatctgggggtggcgcgtgcgacggtcgtgacg
gcctatgagcagctggtggccgagggctatctcatggcgcggcgcggatcgggttatacc
gtctgtgccatgggcgaggtggagcttccggcgaaagggacgcccacgccacctgcggac
ctcagcgagcggggagacctgctcttggaggctggccagccggacatgcgtctctttccg
caccgcgcctgggcaaaagccgttgctcgcctctgccgcacacgtccagaagatatgttg
atgggctgcgggcgctttggtcatccggacctgcgccaggccattgccgcccatgtgaac
gattggcgcgggatcgccgcgcggccggatcaggtgctggtcacctctggcgcgaccgag
gcgttggatgtttgtctcgcggcgctggcctcgagcaccggagcggttggggtggaggat
cccggctatcccccgatccgacggtttgcgcaggcgcaggggcgtcgcatccgagacttg
gcgctcgattcccaaggggccgaagtccctacaactggcgatggcaccgatgtggtggtt
ctgacgccgtcgcatcaatacccgcttggtggcgcgatgagtgcgggccggcgacaagag
tttgtgcgctgggcggcgcagtcacagggctggatcatcgaggacgattacgattcggaa
tttcgctatgcgggccgaccgattcccgcgctggcaggtgtcgacgggcaggggcggaca
gtctacatcggcagcttctccaagattttctcgaacagcttgcggatggggtacatcgtg
gcccccgaggcgctggtggagcgcctcgtgcgggcgatgcgtcgcaagggtgcgcgtgcc
agtgccatgccccaagcggctctggcggagtttatgcagcacggagagttctaccggcac
ctgcgccgggtgcgccgaatctatgcggaacggcaccggaccctgatcgcgcggttgcgc
tcggatttctctgatgtgggccatgtggaggattatcaagctggcatgcaggtcgtgctg
catctgcgtcccgaaatttgcgatcagaccgtgacaacagccgcacgcgcagccggtgtg
ggtgcggaggcgctctcaagctacagccgccgcgcgggcgccttcaatggggtggttctg
ggcgcctgcctcaatgatcttgatgagcaggcagaagccctgtcgcgcctgcgcgcgacg
atttcctcaacaggataa
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