Ruegeria sp. TM1040: TM1040_2209
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Entry
TM1040_2209 CDS
T00359
Name
(GenBank) Cobalamin (vitamin B12) biosynthesis CobW
KO
K02234
cobalamin biosynthesis protein CobW
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99987 Cofactor metabolism
TM1040_2209
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Ortholog
Paralog
GFIT
Motif
Pfam:
cobW
CobW_C
AAA_22
TsaE
nSTAND6
Viral_helicase1
AAA_28
nSTAND3
AAA_33
ABC_tran
AAA_18
ATPase_2
AAA_14
AAA_16
NACHT
AAA_24
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABF64941
RoseoBase:
TM1040_2209
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All DBs
Position
2319801..2320835
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AA seq
344 aa
AA seq
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MTSLNKIPVTVITGFLGAGKTTLIRHLMQNPQGKRLAVVVNEFGTAGVDGDILKSCADDN
CPAENIMELANGCICCTVADDFIPTIESLMALPEPPEHIVIETSGLALPKPLLKAFDWPA
IRSRITVDGVIALADAEAVAKGQFAPDLDAVQAQREADESLDHETPLSEVFEDQIACADI
VLLSKADLAGEAGVDKARAIIESEAPRKLPILPMTEGVIDPRVILGLEAAAEDDLDARPS
HHDGHHDHEHDDFESIVVEMGEVSDPEDLQKRIIEMARSRNILRVKGYVAVEGKPMRMLV
QAVGERLRAQYDQPWGAQERKTQLVVIAEHDNVDTAGIHADLGA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacctcattgaacaagatccccgtcaccgtcatcaccggctttctgggcgcgggcaaa
accacattgatccgtcacctgatgcagaacccgcagggcaagcgcctcgctgtggtggtg
aacgaatttggcaccgccggtgtggatggcgacatcctgaaatcctgcgcggatgacaac
tgccccgcagagaacatcatggagctcgcaaacggctgcatctgctgcaccgtggcggat
gatttcatccccaccatcgagagcctgatggcgctgcccgaaccgcccgaacacatcgtt
atcgagacctctggcctggcgctgcccaaaccgctgctcaaggcctttgattggcccgcg
atccgctcgcgcatcaccgttgacggtgtgatcgctctggctgatgccgaggccgtcgcc
aagggccagtttgccccagatctggacgccgtgcaggcccagcgcgaggcagacgagagc
ctcgatcacgaaaccccgctctccgaagtctttgaagatcagatcgcctgcgccgatatc
gtactgttgtccaaggccgatctcgccggtgaggccggtgtcgacaaagcccgcgcgatc
atcgaatctgaggccccgcgcaaactgccgatcctgccgatgaccgaaggcgtgatcgat
cctcgcgtgatcctcggactggaagctgcggccgaagacgaccttgatgcccgcccgagc
catcacgacggacatcacgatcacgaacatgacgattttgaatcgatcgtggtcgaaatg
ggcgaagtatccgaccccgaagacctgcaaaaacggatcatcgagatggcccgcagccgc
aacatcctgcgggtgaagggctatgtggccgtggaaggaaaaccgatgcgaatgctggta
caagcggtgggcgaacgtctgcgcgcgcaatacgaccaaccctggggcgcacaggagcgt
aaaacccagctggtggtgatcgccgagcatgataacgtcgacacagcaggcatccacgcc
gatctcggggcctga
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