Ruegeria sp. TM1040: TM1040_2233
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Entry
TM1040_2233 CDS
T00359
Name
(GenBank) ABC transporter related
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
sit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_2233
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM1040_2233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_2233
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
TM1040_2233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_19
DUF815
SbcC_Walker_B
AAA_16
NACHT
AAA_21
AAA
AAA_30
NB-ARC
DUF87
TsaE
MMR_HSR1
AAA_15
AAA_25
AAA_23
RsgA_GTPase
NTPase_1
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
ABF64965
RoseoBase:
TM1040_2233
LinkDB
All DBs
Position
complement(2346762..2347448)
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AA seq
228 aa
AA seq
DB search
MSLLSVKSLTASYGVSQALFGVDLDINPGEVVALMGRNGMGKSTTVKAICRMINAGGTLE
FDGQNLHALPSHKAARLGLGLVPEGRRCFRDLTVAENLLATSRPGDWDMARVTQLFPRLG
ERHSQLSASLSGGEQQMLAIGRALMTNPRLLILDEATEGLAPIIRQEIWAAINQLKADTD
MAILVIDKTLAELAQVCDRAVVLERGKTVWSGAMAALTPDISERYVGV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagccttttgtccgtaaaatctctcactgcctcctacggcgtgagccaggccctcttt
ggtgtcgatctcgacatcaacccgggcgaggtagtggctttgatgggccgcaacggcatg
ggcaaatccaccaccgtcaaggcaatctgccgcatgatcaacgcaggcggtacgctggag
tttgatggccagaacctgcacgctctgcccagccacaaggccgcacgtcttggcctcggt
ctggtgccggaggggcggcgctgttttcgggacctcacggtggccgaaaaccttctggcc
accagccgtcccggtgactgggacatggcccgcgtcacgcagcttttcccgcggctgggc
gaacgccacagccagctttcggcgtcactgtcgggcggggagcagcagatgctcgcgatt
ggtcgcgcgctgatgaccaacccgcgtctcctcatcctggatgaggcgacagagggcctt
gcgccgatcatccgccaggagatctgggcggcgatcaaccagctcaaggcggacaccgac
atggcgatcctcgtgatcgacaagacgctggccgagctggcgcaggtctgcgaccgcgcc
gtggtgctggagcgcggcaagaccgtctggagcggtgccatggcggcgctgaccccggac
atcagcgaacgctacgtgggggtctga
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