KEGG   Ruegeria sp. TM1040: TM1040_2373
Entry
TM1040_2373       CDS       T00359                                 
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TM1040_2373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sit03400]
    TM1040_2373
Enzymes [BR:sit01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     TM1040_2373
DNA repair and recombination proteins [BR:sit03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     TM1040_2373
    RecFOR pathway proteins
     TM1040_2373
SSDB
Motif
Pfam: RuvC
Other DBs
NCBI-ProteinID: ABF65105
RoseoBase: TM1040_2373
UniProt: Q1GE11
LinkDB
Position
complement(2493554..2494120)
AA seq 188 aa
MCSRFVLVLASKQTINNQRSGGGMRILGIDPGLRTLGWGVIESNGARLSHVANGLCHSDG
DDLGERLLSLHNQVTEIIDAYRPDQAAIEQTFVNKDGAGTLKLGQARGVALLTLAKAGLP
TGEYAPNRVKKTVVGVGHAEKEQVLHMVKLQLPGCAPRGADAADALAIAICHAYYGGSNQ
RQLKEVGA
NT seq 567 nt   +upstreamnt  +downstreamnt
atgtgttcgcgttttgtgctagtgctggcctccaagcagacaataaataatcaaagatcg
ggcggcggaatgcgcatattgggaatcgatccggggcttcggacccttggatggggggtg
atcgaatcaaatggcgcccgtctcagccatgtcgctaatggcctgtgccactctgatggg
gatgaccttggcgaacggctactgtcgctgcacaatcaggttacggaaatcatcgacgcc
tatcgaccggatcaggctgccattgagcagacttttgtcaacaaggatggcgcgggaacg
ctcaagctaggtcaggcgcgtggtgtcgccttgctgaccttggccaaagcaggtctgccg
acgggggaatatgcgccgaaccgcgtgaagaaaaccgtggttggggtcgggcatgccgaa
aaggaacaggttctgcatatggtgaagctgcagctgccgggttgtgcgcccaggggcgcg
gatgcggctgatgctctggcgattgcgatctgtcacgcctattacggaggcagcaaccag
cggcaactcaaagaggtgggcgcatga

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