Ruegeria sp. TM1040: TM1040_2396
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Entry
TM1040_2396 CDS
T00359
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_2396
Transporters [BR:
sit02000
]
Other transporters
Pores ion channels [TC:
1
]
TM1040_2396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ABF65128
RoseoBase:
TM1040_2396
UniProt:
Q1GDY8
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All DBs
Position
2520607..2524614
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AA seq
1335 aa
AA seq
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MKQNLQSLIFTCGLATCPVLTPLPTLAQDASESGGLLVSFLEDTLSGDSRTVSVEGLEGA
FSSQAKIAKLTVSDAEGIWLTVEGAELDWNRLALVRGRFSVNHLKADRITVARSPEPVPA
DPELPMPEATPFRLPELPVSIEIGDIAAGEIRLGEALTGQAASLSVDGALTLADGALETD
LNVARLDRRGDALHLAASFSNTTEQLALDIALDEAPGGLLSTAMDLPGRPDLRLAIKGEG
SLTDFTADIGFASNSHDRITGTVSLRGLGDVDSDTDAGLAFSADIGGDIDPLLPPAYRPF
FGPGMRANVKGRSLSSGGVELDNLVLRTRALQLTGALRLEAGMLQTANIKAAITAPEGQA
AVILPVSGADTTVAAVTMDLKKPEGENWTINAELDSLRTADLSIKRAVVNAAGALDQDAG
FNLDGALDARLSGFVLSDPALAAATGSKLSLSAQLTTKDGADFLVRDLELQGDSYSARGE
LRFDRLEGDLRIATTLSLLAENLSRYSVLAGLDLSGSAEADVSGHFQPLSGAFGVDLALL
GRDLGTAIPNVDPLLVGESRLKLVAARDTAGIRIDQFHLQTAEVSATGQGTLDSGEGALR
LDATLARLDRFVTDLPGPLTLSANFDRSGNRLDGTVALRGPQKTAMDLDGSFTLDGAADF
GFEAFVGAPEAFVPELAGAPVIATGTATRRAAQWTGDMTLTATGGTRARIKGGFHEADGA
IDLDLSALLARVEQFAPAITGQATARLIASRRDGQWQAKGDVTAPGDTTATFDAGFVETS
GDLDLKLKAEVAEVRAYAPTLPGRASADISATRRAGAWAAGGKVTGPAGTAADLDVELSE
TDGTARVRFDALVRELQQIVPGLDGALSAKGEARRADGIWTVESTADGPLGMASRLAGTW
DEARAIADVSAKGTLRLEGANAFLKPNLIKGLAEFDLALRGPAQLNSVSGTITTSGAQMV
LPQAAQTIEGISTRISLNSGSAAVNLSARPRDGGRIEVNGPVSLAAPYAGDLRISLADVV
LTDNLSFDTSLGGQLRFSGALAGNSRLSGRIDIGETNFNLNTAGGAVSAAPIPPIRHVGQ
TGAQIATRARAGLIETGSAASKSNSNIALDVLISAPNKIFARGRGLNAELGGTIAVGGTT
ANLAPSGQVGLIRGTFDILGRRLNLDEGRVTLLGDLKPYLEFVSSANTEQGTATLSIAGP
LDGPQIKVTSEPPRPSEEALALLLFGDNIQDISPLALARLASSALTLSGRGGGANKALRD
STGADNADIGIDNLGVGQLGLGGYLADNVYTDVNVTAEGNSELSINLDLTKSLTVAGKAD
SEGETGLGVYFKRDY
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacagaacctccagagcctcatcttcacctgtggcctcgccacctgcccggtcctg
actcccctgcccaccctggcacaagacgcgtcagaatctggcggcctcttggtgtccttt
ctcgaggatacactctccggcgacagccgcacggtgagtgtcgagggtctggagggcgcg
ttttcctcgcaggcaaagatcgccaagctaaccgtctctgacgcagagggcatctggttg
acggtcgaaggagccgagctcgattggaaccgcctggcactggtacgcggacgcttttcg
gtcaatcacctcaaggcagatcgcataaccgtggcgcgcagcccggaaccggtgcccgca
gacccggaattgcccatgcccgaggcgacacctttccggctcccggaattgcctgtgtca
attgagatcggcgacatcgccgcaggtgaaatccggcttggcgaagccctgaccggccaa
gcagcctccctgtcggttgatggcgcgctgacactagcggatggggcgctggagaccgac
ctcaatgtggcacggttggacaggcgcggtgacgcgctccatcttgcggcgtctttttcc
aacaccaccgaacagctcgcactggatattgcgctcgacgaggcacccggcggcttgctc
tcgaccgcgatggacttgcccggccgccctgatctacgcctcgccatcaaaggcgaaggc
tcgcttacagatttcacggcagacatcgggtttgccagcaatagccacgaccgcatcaca
gggaccgtgagcctgagaggcctgggagatgtcgacagcgatactgatgcggggctggcg
ttctcggcagacatcgggggcgacatagacccgctgctcccgcccgcatatcgccccttc
tttggccccggcatgcgcgccaatgtcaaagggcgcagcctgagctctggcggtgtcgaa
cttgacaacctcgtgctgcgtacccgcgccttgcaactgaccggcgcgctacgcctagaa
gcgggcatgttgcagaccgccaatatcaaggctgcaatcacagcgcccgaggggcaagcc
gcggtaatccttccggtgtcaggcgccgacaccacggttgctgccgtgacgatggatttg
aagaagccggaaggcgaaaactggaccatcaacgccgaactcgacagcctgcgcacagca
gacctgagcatcaaacgcgcggtcgtgaacgccgcaggggcgctggaccaagacgcaggt
tttaaccttgatggggcacttgatgcgcggctcagcggctttgtgctttcggatcctgcg
ctggctgcggcaaccggcagcaaactcagcctcagcgcacagctgacgacgaaagacggc
gccgattttctggtgcgcgatctcgaactgcagggcgactcttatagcgcgcggggcgag
ttgcgttttgacaggctcgaaggagatctgcgcatcgccaccacgctcagtcttctggca
gaaaacctcagccggtattcggtgttggccgggctggatctgtcaggatcggcagaggcc
gatgtgagcgggcatttccaacctctgagcggcgccttcggggtcgatcttgcgcttctg
gggcgcgatcttggcaccgcaatcccgaatgtggacccgctcttggtgggagagagccgc
ctgaaactggtggccgcgcgcgacacggctggaatccggattgaccaatttcacctgcaa
accgcagaagtatccgccaccgggcaaggaacgctcgatagtggcgaaggcgcgctgcgc
cttgatgccacgctcgcacggctcgaccggtttgtgaccgacctgcctggcccgctcacg
ctctcggcgaatttcgaccgcagtggcaaccgtctcgacggcactgtcgctttgcgcggg
ccacagaaaaccgcgatggatctcgacggcagcttcacgcttgacggtgcagccgatttt
gggtttgaggcctttgttggtgcgcccgaagcctttgttcccgaactcgctggggcgccg
gtgattgcaactggcacggccactcggcgcgcggcgcaatggaccggggatatgacgctc
actgccaccggcggtacgcgcgcccggatcaaggggggatttcatgaggccgacggcgcg
atcgaccttgatctctccgcgctgttggcgcgagtggagcaatttgcccctgccatcacc
ggtcaggccacggcaagactgatcgcatcccggcgggacggtcagtggcaggccaaaggt
gatgtcacggcccccggcgataccaccgcaacttttgacgcaggctttgttgaaacctcg
ggcgatcttgatctcaagctgaaggcggaggtggcagaagtgcgcgcctacgcgccaacg
cttccagggcgggcctcagcggatatttccgctacccggcgggctggcgcatgggcggca
gggggcaaggttacagggcccgcaggaacggcggctgacctcgatgtcgagctcagtgaa
accgatggcacggcccgcgtccgctttgacgccctggtgcgcgagctacagcagattgta
ccagggctggacggggcactgagcgcgaagggggaagcccgccgcgcagatggtatctgg
accgtcgagagcaccgcagacggcccacttggaatggcctcacggctggctggaacatgg
gatgaggcgcgggcaatcgcggatgtctcggccaagggaacgttgcggctggaaggggcc
aacgcctttttgaagcctaatctcatcaaggggctggccgaatttgatctcgcactgcgc
gggccggcgcaactcaattcggtgagcggcacaatcaccacatccggcgcgcagatggtt
ctgccccaagcagcgcagaccatcgaggggatctccacccgtatctcgttgaatagtggt
tccgccgccgtgaatctttcggcccgtccgcgtgacggcgggcgcatcgaggtcaatggc
ccggtctctcttgccgcgccttatgcaggggatctgcggatctcgctcgctgacgtggtg
ctgaccgacaacctgtcatttgacacctcccttggcgggcagctgcgcttttcgggcgcg
cttgcgggaaacagtcgcctctccgggcggatcgacattggcgaaaccaacttcaacctc
aacacagccgggggcgctgtatcagccgcgcccattccgccaattcgccacgtcggccaa
acgggcgcacagatcgcaaccagagcccgcgccggcttgattgagacgggatctgcggct
tccaagagcaacagcaatatcgcacttgatgtgcttatcagtgcgccaaacaagatcttt
gcgcggggccgcgggctcaatgcggaactgggcggcacaatcgcggtgggtggcaccacc
gccaatcttgcgccttccgggcaagtgggtctgatccgtggcacctttgacattctgggg
cgcaggctgaacctcgacgaagggcgcgtgacgctcttgggcgacctcaagccctatctg
gagtttgtctcgagcgccaataccgaacagggcactgccaccctctctattgccggtccc
ctcgatggcccgcagatcaaagtcacatcagagccacctcgaccaagcgaagaggcgctg
gccctgctgctgtttggggacaacatccaagacatttcaccgctcgcgcttgcgcggctg
gccagttctgccctgacactgagcggtcgcggcggtggcgcgaacaaggcgctgcgtgac
agcaccggcgccgacaatgcagatattggcatcgacaatctcggcgtggggcagctgggg
cttggcgggtatcttgcggacaacgtgtacacggacgtgaacgtgaccgccgagggcaac
agcgaactgtcgatcaacctcgaccttaccaaatccctcaccgtggccggcaaggccgat
agcgaaggcgagacggggctcggggtgtatttcaagcgggattattaa
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