Ruegeria sp. TM1040: TM1040_2416
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Entry
TM1040_2416 CDS
T00359
Name
(GenBank) extracellular solute-binding protein family 1
KO
K17321
glycerol transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_2416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_2416
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Glycerol transporter
TM1040_2416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ABF65148
RoseoBase:
TM1040_2416
UniProt:
Q1GDW8
LinkDB
All DBs
Position
2556474..2558207
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AA seq
577 aa
AA seq
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MRKYLLTAVAAGAVIAATGSYADEAAAQKWIDEEFQPSVLSKAEQLAEMQWFINAAEPYK
GMEINVLSEGIPTHSYESEVLTKAFEEITGIKVNHQILGEGEVVQAVQTQMQTKRNLYDA
YVNDSDLIGTHSRLQLAYNLSDMMEGDFKDVTNPGLDLDDFMGTQFTTGPDGDLYQLPDQ
QFANLYWFRKDWFDREDLKAAFKEKYGYELGVPVNWSAYEDIAEFFSEDVKEIDGTTIYG
HMDYGKRAPDLGWRMTDAWLSMAGAGSKGEPNGVPIDEWGIRMEEGTCNPVGASVTRGGA
ANGPAAVYAIRKWDEWLRKYAPPGAASYDFYQSLPALAQGNVAQQIFWYTAFTADMVKPK
SEGNNTVDDSGTPLWRMAPSPHGPYWEEGQKVGYQDVGSWTFLNSTPLDRAQAAWLYAQF
VVSKTVDVKKSHVGLTFIRDSSVNHESFTERAPKLGGLVEFYRSPDRTAWSPTGINVPDY
PKLAQIWWQQIGDVNSGAFTPQEAMDRLAQEMDITMGRMQRADEQANVYGGCGPRLNEEK
DAEWWYANGGAKPKLENEKPQGQTVNYDELVARWAAN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagtatcttttgaccgcagttgcagccggggctgtaattgcggcaacgggttcg
tatgccgatgaggcagcggcccagaaatggatcgacgaggagtttcagccgtcggttctg
agcaaagcagaacaacttgccgagatgcagtggttcatcaacgccgccgagccttacaag
ggcatggagatcaacgtactgtccgagggcatccccacgcacagctacgaatccgaggtg
ctgaccaaggcgtttgaggaaatcaccggcatcaaggtgaaccaccagatcctgggcgaa
ggcgaggtcgttcaggccgtgcagacccagatgcagaccaagcggaacctctatgacgca
tacgtcaacgactccgacctgatcggcacgcactcgcgcctgcagctcgcttacaacctg
agcgacatgatggaaggcgacttcaaggatgtgaccaaccccggtctcgaccttgacgat
ttcatgggcacccagttcaccactggccccgatggcgacctctaccagctgcccgaccag
cagtttgcgaacctctactggttccgcaaagattggttcgaccgcgaagatctgaaggcc
gccttcaaagagaaatacggctacgagctgggtgttccggtcaactggtccgcctatgaa
gacattgccgagttcttctctgaagatgtgaaagaaatcgacggcaccaccatctacggc
cacatggattacggcaaacgcgcgcctgacctcggctggcggatgaccgatgcgtggctc
tccatggccggtgcgggctccaagggtgagccgaacggtgttccgatcgacgaatggggc
atccgtatggaagaaggcacctgtaacccggtgggcgcaagcgtcacccgcggcggtgct
gcaaacggtccggcagcagtctatgcgatccgcaagtgggacgaatggctgcgcaaatac
gcacctcccggtgccgcgtcttatgacttctaccagtctctgcccgcactcgctcaaggc
aacgtcgcgcagcagatcttctggtacaccgcctttaccgcagacatggtgaagccgaag
tccgaaggcaacaacaccgtcgacgacagcggcaccccgctgtggcgcatggcaccgagc
ccgcatggcccctactgggaagaaggccagaaggttggctatcaggacgtgggctcctgg
accttcctcaactccaccccgctggaccgcgcacaagccgcatggctctatgctcagttc
gtcgtctccaagaccgtcgacgtgaagaagtcccacgtgggtctgaccttcattcgcgac
agctccgtcaaccacgagagcttcaccgagcgtgcgcccaaactgggtggtctggtggaa
ttctaccgttcgcccgaccggactgcatggtccccgaccggcatcaacgtgcctgactat
cccaagctggcgcagatctggtggcagcagattggtgacgtgaactccggtgccttcacc
ccgcaagaagcgatggatcgtctggcgcaggaaatggacatcaccatgggtcgtatgcag
cgtgcagacgagcaggcgaatgtctatggcggctgcggcccgcgtctgaacgaagaaaaa
gacgcggagtggtggtacgccaatggcggcgccaagccgaagctggagaacgaaaagccg
caaggccagaccgtcaactatgacgagctggtggcgcgctgggccgcgaactga
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