Ruegeria sp. TM1040: TM1040_2500
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Entry
TM1040_2500 CDS
T00359
Name
(GenBank) protein of unknown function DUF224 cysteine-rich region
KO
K11473
glycolate dehydrogenase iron-sulfur subunit [EC:
1.1.99.14
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00630
Glyoxylate and dicarboxylate metabolism
sit01100
Metabolic pathways
sit01110
Biosynthesis of secondary metabolites
sit01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TM1040_2500
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
TM1040_2500
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Gene cluster
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Motif
Pfam:
CCG
Fer4_8
Fer4_7
Fer4_17
Fer4_10
Fer4_9
Fer4_16
Fer4_6
Fer4
Fer4_4
Fer4_2
Fer4_21
Fer4_20
Fer4_18
Cytochrom_C552
Fer4_3
ADH_zinc_N
Neurochondrin
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
ABF65232
RoseoBase:
TM1040_2500
UniProt:
Q1GDN4
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Position
complement(2641580..2642899)
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AA seq
439 aa
AA seq
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MQTSFTDAQLQDPGTQRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLE
NERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIDKHYKRPFGDRALRWIL
ARILPYPTRFRLALLGAKIARPFRGLMPDPRLRAMLEMAPKVIPPVSRNDDPQSFAPEGR
QVKRVALMTGCAQKALNTDINDATIRLLRRLGCEVVVADGAGCCGALTHHMGREDESHAT
AAKNIRAWMAEKNGKGLDAIVINTSGCGTTVKDYGHMFRNDALAQDAATVSNLAMDISEL
LMQLEMPEAEDKGLTVAYHAACSLQHGQQIKTHPKTLLKRAGFRVVEPADSHLCCGSAGT
YNLLQPEISAQLKARKLRTLEAKNPDIISAGNIGCMMQIGSGTEIPIVHTVELLDWATGG
PQPPALTAERSRPSVPILR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgagtttcaccgacgcgcaattgcaggaccccggtacgcagcgggccaacgag
atcctgcgcacctgtgtgcactgtggtttttgtacggcgacctgtccgacctatcaagtg
ctcggggacgagttggacagcccgagaggccggatttacctcatcaaggatatgctcgag
aacgagcgcgtgccggatgagaaaaccgtaaagcatatcgacagatgcctgtcgtgcctt
gcttgtatgaccacttgtccatcgggcgtgcattacatgcatcttgtggatcacgcgcgt
gcctatatcgacaagcattacaaacgcccctttggtgatcgggcactgcggtggatcctg
gcgcgcatcctgccctatcccacgcggtttcgcctcgcgctgttgggagcaaagattgcg
cgtcccttccggggactgatgcctgacccaaggctgcgggcgatgctggagatggcgcca
aaggtcatccccccggtgagccgcaatgacgacccgcagagttttgcgccggaagggcgg
caagtgaaacgcgtggcgcttatgacgggctgcgcgcaaaaggcgctcaatacggatatc
aatgacgccaccatccggctccttcggcgtttggggtgcgaggtggttgtggcggacggg
gccggctgttgcggggctctgacgcatcacatggggcgtgaggacgaaagccacgcaacc
gccgccaagaacatccgcgcgtggatggcagagaagaacggcaagggccttgatgcgatt
gtcatcaacacatcgggctgtggtaccacggtcaaggactacggccacatgttccgcaat
gatgcgctggcacaggatgcggcaactgtgtcgaacctggcgatggatatctccgagttg
ctgatgcagcttgaaatgccagaggctgaggataaggggctgacggtcgcctatcacgcc
gcctgttcgctgcagcatggccaacagatcaagacgcatcccaagacgctgctgaaacgc
gcgggctttcgagtggttgaaccagccgacagccatctgtgctgcggctctgcagggacc
tataatctgctgcagccggagatttccgcacaactaaaggcacgcaagctgcgcacgctt
gaggcgaaaaatcccgacatcatctctgcggggaacatcgggtgcatgatgcaaatcgga
tctggcaccgagatcccgatcgtgcacactgtggagctcttggactgggcaaccggaggc
cctcagccacccgctctcacggcggagcgcagccgaccctcagttcccatcttgcgctga
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