Ruegeria sp. TM1040: TM1040_2502
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Entry
TM1040_2502 CDS
T00359
Name
(GenBank) D-lactate dehydrogenase (cytochrome)
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00630
Glyoxylate and dicarboxylate metabolism
sit01100
Metabolic pathways
sit01110
Biosynthesis of secondary metabolites
sit01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TM1040_2502
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
TM1040_2502
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Gene cluster
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
DUF6889
Motif
Other DBs
NCBI-ProteinID:
ABF65234
RoseoBase:
TM1040_2502
UniProt:
Q1GDN2
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Position
complement(2644053..2645501)
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AA seq
482 aa
AA seq
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MEMPPPNAAILSLKAELLQRLQQVLPKDALISDEAETRAYECDALTAYKCPPMLAVLPRS
TQEVSDVLRICHQMNVPVVPRGAGTSLAGGALPTADCVILGVARMNEVLETDYDNRVIRV
QTGRTNLSVSGAVEEEDFFYAPDPSSQLACAIAGNIAMNSGGAHCLKYGVTTNNLLGVTM
VMMDGTVVEIGGAHLDAGGLDLLGVICGSEGQLGVVTEATLRILRKPEGARPVLVAFDSN
EVAGACVSDIIKAGVLPVAIEFMDRPCIEACEAFAKAGYPMCEALLIIEVEGSEAEIDHQ
LKLITEIARRHNPVELREAGDSEEAARIWLGRKSAFGAMGQINDYMCLDGTIPVSALPQV
LRRIGEMSAEFGLKVANVFHAGDGNMHPLILFDANKPGDLELCEAFGAEILKLCVEVGGC
LTGEHGVGIEKRDLMLHQYALADIEAQLRVKDVFDPKWLLNPAKVFPLSTTQSRRNVAIA
AQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagatgccaccccccaatgccgccatcctgtccttgaaggcagagcttttgcagcgc
ctgcaacaggtgttgccaaaggatgcgctgatttcggatgaagcagagacacgcgcgtat
gagtgtgacgcgctgacggcctataaatgtccgccgatgctggcggttctgccgcgctct
actcaggaagtgtcagacgttctgcggatatgtcaccagatgaatgtacccgttgtaccg
cgtggagctggaacatcgctggcggggggcgcattgcctaccgcagactgcgtaatcctc
ggggtggcgcggatgaacgaggtgctggagacggactacgacaatcgtgtcatccgtgtt
cagaccgggcgcaccaacctgtcggtgtccggcgccgtggaagaagaggatttcttttat
gcgcctgacccctcttcacagctcgcctgtgcgattgctggcaacatcgcaatgaattcc
ggtggggcgcattgtctcaaatacggggtgacgaccaacaaccttcttggggtcaccatg
gtgatgatggacggaacggttgtcgaaataggtggcgcgcatctggatgccggtgggctt
gatctcctcggggtgatctgcggcagtgaggggcagctgggcgtggtgaccgaagccacc
ctccggattttgcgcaaacccgaaggggcgcggcccgtgcttgtggcctttgacagcaat
gaagtcgctggggcctgtgtttctgatatcatcaaagcgggcgttctgccggtggcgatt
gagttcatggaccgtccttgcattgaagcctgcgaagcgtttgccaaagcgggctatccg
atgtgcgaagctttgctgatcatcgaagtcgaagggtcagaagcagaaatcgaccatcag
ctgaagctcatcaccgagatcgcgcggcgccacaacccggtggagttgcgcgaagcgggg
gattccgaggaagccgcgcgcatctggcttggacgcaaatccgcgtttggtgcgatggga
cagatcaacgactacatgtgtcttgatgggacgattcccgtttctgccctgccgcaggtt
ctgcgtcgcatcggggagatgagcgcggagttcggcctgaaagtggcaaacgtgtttcac
gcaggggatggcaacatgcacccgctgatcctgtttgatgccaacaaacccggtgatctg
gagctgtgcgaagccttcggggccgagatcctgaagctctgtgtcgaggtcggggggtgt
ctgaccggcgaacacggcgttgggatcgaaaagcgagatctgatgctgcatcaatatgca
cttgctgacatcgaagcccagttgcgcgtgaaggatgtgtttgacccgaagtggctgttg
aacccggcaaaggtctttccgctgtcaaccacgcagagccggcgcaacgtcgcgattgcg
gcgcagtag
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