Ruegeria sp. TM1040: TM1040_2508
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Entry
TM1040_2508 CDS
T00359
Name
(GenBank) 3-isopropylmalate dehydratase, large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00290
Valine, leucine and isoleucine biosynthesis
sit00660
C5-Branched dibasic acid metabolism
sit01100
Metabolic pathways
sit01110
Biosynthesis of secondary metabolites
sit01210
2-Oxocarboxylic acid metabolism
sit01230
Biosynthesis of amino acids
Module
sit_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
TM1040_2508
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
TM1040_2508
Enzymes [BR:
sit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
TM1040_2508
4.2.1.35 (R)-2-methylmalate dehydratase
TM1040_2508
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GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
ABF65240
RoseoBase:
TM1040_2508
UniProt:
Q1GDM6
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All DBs
Position
2649508..2650911
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AA seq
467 aa
AA seq
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MSPKTLYDKIWDAHVAQEAEDGTCLLYIDRHLVHEVTSPQAFEGLRMAGRKVHAPEKTIA
VPDHNVPTTAGRENPDQMPEDSRIQVAALDTNAREFGVHYYPVTDIRQGIVHIVGPEQGW
TLPGMTVVCGDSHTATHGAFGALAHGIGTSEVEHVLATQTLIQKKSKNMKVEITGKLSPG
VTAKDIVLTIIGETGTGGGTGYVIEYCGEAIRDLSMEGRMTICNMAIEGGARAGLIAPDE
TTFEYVKGRPHAPKGAQWEAAVNWWKTLYSDDDAHWDKIVTIRGEDIAPTVTWGTSPEDA
LPITATVPAPEDFTGGKVEAARRALDYMGLTPGMKLSDIEIDTVFIGSCTNGRIEDLRAA
ADVVKGKKIKDGMRAMVVPGSGLVRAQAEEEGLAEIFKDAGFEWRLAGCSMCLAMNPDQL
SEGERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAVTGKLTDVREL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccaaaacactctatgacaagatctgggatgcgcatgtcgcgcaagaagccgaa
gacggcacctgtctgctttatatcgaccgtcacctcgttcacgaggtgacaagcccgcaa
gcctttgaagggctgcgcatggcaggtcgcaaggtgcacgcgccagagaaaaccatcgcg
gtgccagatcacaacgtccccaccactgcaggacgcgaaaaccccgaccagatgccggag
gacagccgcatccaggtagccgcccttgacaccaacgcgcgtgagttcggcgtgcattac
tatccggtgaccgacatccgccagggtatcgtgcacatcgtcggccccgagcaaggctgg
accctgcccggtatgaccgtggtctgtggcgacagccacaccgcgacccacggtgccttt
ggcgcgctggcgcatggcattggcacctcggaggtggagcatgtgcttgccacccagacg
ctgatccagaagaagtccaagaacatgaaggtcgagatcaccggcaagctgtcgccgggc
gtgaccgccaaggacatcgttctgaccatcattggcgaaaccggcaccggtggcggcact
ggctatgtcatcgagtattgcggtgaagcgatccgcgatctgtcgatggaaggccgcatg
acaatctgcaacatggccattgagggcggcgcacgcgccggcctgatcgcgcccgacgag
accacctttgaatacgtcaaaggccgcccgcatgcccccaaaggcgcgcagtgggaagcc
gccgtgaactggtggaaaacgctctactctgacgacgacgcccattgggacaagattgtg
accatccgcggcgaagacatcgcgccgaccgtcacatggggcaccagccccgaagacgcg
ctgccgatcaccgcaaccgtccccgcccccgaggatttcactggtggcaaagtcgaggcc
gcgcgccgcgcgcttgactacatgggcctcacccccgggatgaagctgtcggacatcgag
atcgacaccgtgttcatcggctcctgcaccaacggccgcatcgaagatctgcgcgccgct
gcggatgtagtcaaaggcaagaagatcaaggacggcatgcgcgccatggtggttccgggt
tccggcctcgtgcgcgcccaggcagaagaagagggccttgccgagatcttcaaggatgcc
ggtttcgaatggcgtctggcgggctgctccatgtgtctggcaatgaaccccgaccagctg
agcgagggcgagcgctgcgcctccacctccaaccggaactttgaaggccgtcagggcttt
aagggacgcacgcacctggtgtcgccagccatggccgccgctgctgccgttaccggcaaa
ctcaccgacgttcgcgagctctga
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