Ruegeria sp. TM1040: TM1040_2552
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Entry
TM1040_2552 CDS
T00359
Name
(GenBank) extracellular solute-binding protein family 5
KO
K13893
microcin C transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_2552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_2552
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
TM1040_2552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABF65284
RoseoBase:
TM1040_2552
UniProt:
Q1GDI2
LinkDB
All DBs
Position
complement(2694826..2696676)
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AA seq
616 aa
AA seq
DB search
MSTAALMTSALAVKSTESEAITVSHGYSFYGDLDYPADFEHFDYVNPDAPKGGELAIPFI
GTLDSMNPYSGKGRAHAFSVYPYESLLSDAAPADKYGQSYCLLCETVEYPEDKSWVIFRM
RPEARFSDGTPVTAHDIAFSHNLLLDQGLKSYADFIRRLIPKVEVIDDHTIKFYFADGVS
RRSLIEQVGGVPAWSKKWFDETGQKLNENWIEGPPGSGPYVIEEIDLSRRIVLKRNPDYW
GKDLPVNQGRHNFDSLRVEIFADDTAAFEAFKAGEYTFRAEGDSKKWASGYDFPKVDSGA
VKLEELPNGAPPASSGIVFNLASPELQDRRVREALALAFNFEWSNESLLYGLFDRRASFT
QNSPLMAKGVPEGAERAFLQSLGDLVPDEMLTEEVYIPPTSDPSRLFDRRNARKAAALLD
AAGYTVGDGGMRMSPDGSAFELDFLFSSSSSPTTRGVMENFVDNLENLGVQVNFEVVDTA
QYTSRERDRDYDLVVDSYTTFLGTGTGLEQRFGSEAAAFSLFNPAGLASPLVDEIITRSL
HAETREEETTVMTALDRALRHEFIMIPLWYNPNHWAAYYDQYEHPAEIPPYSLGYLDFWW
YNEDKAKALRDAGALR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcggccctgatgacctcggcgcttgcggtaaagagcacagagagcgaggcg
atcaccgtcagccatggctattcgttttacggcgatctggattatccggctgattttgaa
cacttcgactatgtaaacccggacgcgccgaagggaggggagcttgcgattcccttcatc
gggactctcgacagcatgaacccctattctggcaagggtcgggcgcatgcgttttctgtc
tacccttacgagagcctcctctcggatgcggcacctgcggataaatatggtcagtcctac
tgcctgctctgcgaaaccgtggaatatcccgaagacaagagctgggtgatctttcgcatg
cgtcccgaggcgcggttctccgacggcacaccggtcaccgcacatgacatcgccttcagc
cacaacctgctgctggatcaaggtttgaagtcctacgcagacttcattcgccggctgatc
ccaaaagttgaggtgatcgacgatcacaccatcaagttctattttgctgatggcgtctca
cgccggagcctgatcgagcaggtgggcggcgtaccggcctggtcgaagaagtggttcgat
gaaacgggacagaagctcaacgagaactggatcgaggggcctccgggctctggtccctat
gtgatcgaggaaatcgacctgtcgcgtcgtatcgtgctgaaacgcaaccctgattattgg
ggcaaggatctgccggtcaaccaggggcggcacaactttgattcgctgcgggtggaaatc
tttgccgacgacacggcagcctttgaggccttcaaggcgggcgagtataccttccgcgcc
gaaggcgacagcaagaaatgggccagcggctatgactttccgaaggtcgatagcggcgcg
gtgaaactcgaagagctgccaaatggtgcaccgcctgcgtcatcgggcatcgtgttcaat
ctcgcctctcccgaattgcaagatcggcgtgtgcgcgaagcgctggctctggcgttcaac
ttcgagtggtccaacgagagccttctctatggtctctttgatcgccgtgcgtcgttcacc
cagaactcccccctgatggccaaaggtgtgcccgagggcgccgagcgcgcgtttctgcag
agcctcggcgaccttgttccggacgagatgctgaccgaggaggtctatatcccgccgacc
tccgatccttcgcgactgtttgaccgccgcaacgcacgcaaggcagcggccttgctggat
gcggccgggtatacggtgggcgatggcggcatgcgcatgtctccggatggctctgcgttt
gagctggatttcctgttttcctcctcatcctcgcccaccacgcgcggggtgatggagaac
ttcgtcgacaacctcgaaaaccttggcgttcaggtcaatttcgaggtggtggatacggcg
caatacaccagccgggaacgggaccgcgattatgatctggtggtcgacagctacaccacg
ttccttggcaccggtaccggtctggagcagcggtttgggtccgaggccgcagccttctcg
ctgttcaaccccgccggtttggcctccccgctggtggatgagatcatcacgagatcgctg
cacgctgagacccgcgaagaagaaactaccgtcatgacggcgctggatcgcgctttgcgg
catgagttcatcatgatcccgctgtggtataacccgaaccattgggccgcctattacgat
caatatgagcacccggcggaaatcccgccctatagcctcgggtatctggacttctggtgg
tataacgaggacaaggccaaagcgctgcgcgatgctggcgcgctgaggtaa
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