KEGG   Ruegeria sp. TM1040: TM1040_2556
Entry
TM1040_2556       CDS       T00359                                 
Name
(GenBank) DNA repair protein RecO
  KO
K03584  DNA repair protein RecO (recombination protein O)
Organism
sit  Ruegeria sp. TM1040
Pathway
sit03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    TM1040_2556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sit03400]
    TM1040_2556
DNA repair and recombination proteins [BR:sit03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     TM1040_2556
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      TM1040_2556
SSDB
Motif
Pfam: RecO_C RecO_N
Other DBs
NCBI-ProteinID: ABF65288
RoseoBase: TM1040_2556
UniProt: Q1GDH8
LinkDB
Position
complement(2700556..2701281)
AA seq 241 aa
MDWRDQGILLTVRRHGESSALIEVFTEDHGLHAGLVRGGASRKMAPHLQPGAQLDLTWSA
RLEDHLGTYKAEPLRSRAGMALSGRLALAGLNAVCALLAFALPDRAPYPALYHRSSALLD
LLDSEDLWPLAYLRWELSLLEDLGYGLDLSACAATGVTQDLRYVSPKTGRAVSGAAAGEW
ADRLLPLPPVMRGEGAAEDIEILTALRTTGFFLESKLAPALGNRPIPEARGRFLDALARR
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atggactggcgcgatcaaggcatattgctcacggtgcgccgccatggcgaatcctcggcg
ttgatcgaagtcttcactgaagatcatgggttgcatgcgggtctcgtgcgtggaggcgcc
agccgcaagatggcgccgcatctgcaacccggcgcgcagctggacctcacatggtcagcg
cgtctcgaagaccacttgggcacctacaaggccgaaccgttgcgcagccgcgcgggcatg
gcgctgtcgggacgtcttgcgcttgcaggcctcaatgcggtttgtgcgctgttggccttt
gccctgccggatcgcgcaccttatcccgcgctctatcatcgcagctccgcgcttctggac
cttctggacagcgaagacctctggcctttggcctatctgagatgggaactctcgctgctc
gaagatctgggctacgggctcgatctttccgcctgcgccgctacgggcgtgacacaggat
ctgagatatgtctcgcccaaaaccgggcgcgcggtctccggcgcggcagctggcgaatgg
gccgaccggctgctgcccttgccccccgtgatgcggggcgagggggcagccgaagacatc
gagatcctgaccgcactcagaaccacgggatttttccttgaatcaaagcttgcgcctgct
ttgggaaatcgtcccatcccggaggcgcgcggccggtttctggatgcgctggcccgtcgc
gtttag

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