Ruegeria sp. TM1040: TM1040_2641
Help
Entry
TM1040_2641 CDS
T00359
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase putative
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00540
Lipopolysaccharide biosynthesis
sit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
TM1040_2641
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sit01005
]
TM1040_2641
Enzymes [BR:
sit01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
TM1040_2641
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
TM1040_2641
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
TM1040_2641
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
TM1040_2641
Lipopolysaccharide biosynthesis proteins [BR:
sit01005
]
Lipid A
TM1040_2641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
ABF65373
RoseoBase:
TM1040_2641
UniProt:
Q1GD93
LinkDB
All DBs
Position
2775250..2776446
Genome browser
AA seq
398 aa
AA seq
DB search
MFGPGGTQIPNPLRLKRPEGELVWAHATTQERLLGLCDVGCRLKMMRPDLSVMLTWEEDM
RPAKLPEGCDIPLGPLTVEQPNDIRNFLDNWSPDVCVWAGGRLRRLLMRHMREREMPALL
CDIDADELPSRASRWLPDQRHRLLNGFAAILVPGTEVSERLKRAGVAPERIHPAGRLFQS
STPPSCNDDELAQMQKQFASRPLWLAAHVSLSELPAVLKAHRGALRLLHRLLLVLTVDTF
EDLDAARSLLRKEGLSFADWDMGEDPEDHTQVAIGLTENLGLWYRLCPISFLGNSLIRGA
QGTNPLDAAALGSAILHGPGVVAHAQAYQRLAALDAAERIHGEEELADAVFRLSSPDRAA
EMALAGWQVVTEGAVMTDTLLERIQDLLDQSELSHAPA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccccggcggaacacagatcccaaaccccctgcggctgaaacgccccgagggc
gagctggtctgggcccatgcgaccacccaggaacgtctcttggggctttgtgacgtgggc
tgtcgtctcaaaatgatgcgcccggacctctcggtgatgctcacgtgggaagaggacatg
cggcccgccaaattgcccgagggctgcgacatcccgctcgggccgctgacggtggagcaa
cccaacgacattcgcaactttctggacaattggtctcccgatgtctgcgtctgggcgggc
gggcgtttgcgtcgcctcctgatgcgccatatgcgcgagcgggagatgcccgcgctcttg
tgcgacatcgacgcggacgagctgccaagccgggcttcgcgctggctgccggatcagcgc
catcgtctgctcaacgggtttgccgcgatcctggtgccaggcaccgaggtctcagagcgg
ctgaaacgtgcaggtgttgcgcccgaacgcatccaccccgcaggccgcctgtttcaatcc
agcaccccgccaagctgcaacgacgacgaactggcgcagatgcagaaacaatttgccagc
cgcccgctctggcttgccgcgcatgtctcgctttcggaactccccgccgtgctcaaggcg
caccggggggccctgcgactgctgcaccggctcttgctggtgctcacggtggacacgttt
gaggatctcgacgccgcccgcagcctcctcagaaaagaggggctctcctttgccgactgg
gacatgggcgaagaccccgaggaccacacgcaggtcgccattggcctcacggaaaatctt
ggtctgtggtatcggctctgcccgatcagtttcctcggcaacagcctcattcggggggcg
cagggcaccaacccgctggacgccgccgcacttggctctgcgatcctgcatggccccggc
gtcgtcgcccatgcccaggcctatcagcgcctcgcggcccttgatgcggccgagcggatc
cacggcgaagaagagcttgccgatgctgtctttcgcctgtcatcaccggaccgtgccgcc
gaaatggcccttgcgggctggcaggtggtgaccgaaggtgcggtcatgacagacaccctc
ctagagcggatccaggatctgctggatcaaagcgaactctcccatgcgcccgcctga
DBGET
integrated database retrieval system
