Ruegeria sp. TM1040: TM1040_2693
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Entry
TM1040_2693 CDS
T00359
Name
(GenBank) transcriptional regulator, AsnC family
KO
K15782
Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sit03000
]
TM1040_2693
Transcription factors [BR:
sit03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
TM1040_2693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_24
AsnC_trans_reg
HTH_AsnC-type
MarR
HTH_20
HTH_CodY
HTH_Crp_2
HTH_11
HTH_27
MarR_2
HTH_5
LexA_DNA_bind
HTH_1
Rrf2
HTH_PafC
DUF5356
NirdL-like_HTH
HTH_IclR
HTH_10
TrmB
DUF7343
DUF1647
Motif
Other DBs
NCBI-ProteinID:
ABF65425
RoseoBase:
TM1040_2693
UniProt:
Q1GD41
LinkDB
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Position
complement(2835087..2835566)
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AA seq
159 aa
AA seq
DB search
MHLDQRDLDILRILSRDGRITKAALADQVGLSPTPCWERLKKLEKAGLIEGYNAQINLKK
IAPHVTVFVAAELADHTAASFQSFEAAMQRYDEVVACWALGGGFDYLLQIVTCDIDAYQR
LIDAMLDARIGLSRYFTYIVTKPVKGAGVPPLEILLRGS
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcgatcagcgcgaccttgatatccttcgcatcctgtcccgcgatggccgcatc
accaaggcggcccttgcagatcaggtgggtctgtcgccgacaccctgttgggagcggctg
aagaaactggaaaaggccgggctgatcgaaggctataacgcccagatcaacctcaagaaa
atcgcaccgcacgtgaccgtctttgtggctgccgaattggcggatcacacggcggcaagt
ttccagtcgttcgaggcagcaatgcagcgctatgacgaggtagtggcctgctgggcgctg
ggcgggggctttgattatctgttgcagatcgtgacctgcgacatcgacgcctaccagcgt
ctgatcgatgcgatgctggatgcccgcatcggcctcagccgctacttcacctatatcgtg
accaagcccgtcaaaggcgcgggcgtgcctcctctcgaaatcctgctccggggcagttga
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