Ruegeria sp. TM1040: TM1040_2749
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Entry
TM1040_2749 CDS
T00359
Name
(GenBank) TRAP dicarboxylate transporter-DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TM1040_2749
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_2749
Transporters [BR:
sit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
TM1040_2749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABF65481
RoseoBase:
TM1040_2749
LinkDB
All DBs
Position
2896740..2898026
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AA seq
428 aa
AA seq
DB search
MIVGICFVVLLAVGMPIGFAIGLAGVIGIFTMGGGSTFLAIGPSKIFNGLNIFPFLAMPF
FILAGEIMNSTGITGRLVKLAEVLVGRFRGGLAHTNMLASVFFAGLTGSATADAAAFGRT
LVPAMVKQGYKRDYACAVTAAGSIIGPTIPPSGLMVVYGSLMGVSIGGLFAAGLLPGLVI
CAVCMGVIAIGGKRENLPKAARGASLGEVWRTFLSSITALLMPIIILGGILGGIVTPTEA
ASIAVAYALFIGFFVYRTLTFPDLYGMLIRTARITGVIFVIIAFASILGWWMSFERIPQA
IAGSVLGLSENPYAVIAIIICILLVIGMVMDITAILIILGPVLVPLTEQIGLEPIHAGII
FVLALNISLMTPPVGACLFVLSSVTGEKLERISVKLAPFLIAEVIILFLFAFWEDAALLL
PRALGFAP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcggcatctgttttgtcgtgcttctcgcagttggcatgcccatcggctttgcc
attggtcttgcgggtgtcatcgggattttcaccatggggggcggcagcacgttccttgca
attggaccaagcaagatcttcaacgggctcaatattttcccgttccttgcgatgccgttc
tttatcctggcgggcgagatcatgaacagcaccgggatcaccggacgattggtgaagctg
gccgaggtgcttgtgggccgctttcgcggtggccttgcgcataccaacatgctggcgtcg
gtcttttttgcgggtcttaccgggtctgcgactgcggatgcggccgcctttggccgtacg
ttggtgcccgcgatggtgaaacagggctacaaacgcgattacgcctgcgcggtcacggct
gccgggtcaatcatcgggccgaccattcctccctccgggctgatggtggtctatggctcc
ttgatgggggtctcgattggcgggttgttcgcagcgggattgctgccgggcctggtgatc
tgtgcggtctgcatgggcgttattgccattggcggcaaacgcgaaaacctgcccaaagca
gcgcgtggcgcaagcttgggtgaagtatggcgcaccttcctgtcgtcgatcaccgcgctt
ttgatgccgatcattattctcggcggtattctgggcgggatcgtcacccctaccgaagca
gcctccatcgccgtggcctacgccctctttatcggctttttcgtctatcgcacgctgacc
ttcccggatctctacgggatgctgatccgcaccgcgcgcattaccggggtgatcttcgtg
atcatcgcctttgcgagcatcctcggctggtggatgagttttgagcgcatcccgcaggcc
atcgcgggcagcgtgctgggcctgtcggaaaacccctatgcggtgatcgcgatcatcatc
tgcatcctcctggtgatcggcatggtgatggacatcaccgcgatcctgatcatcctcggc
ccggtgcttgtgccgctcacagagcaaatcggactggagccaatccacgccgggatcatc
tttgtgctagcgctcaacatctccttgatgacgccccccgttggggcctgcctcttcgta
ttgtcgtcggtgacaggcgaaaagctcgagcggatttcggtgaagcttgcccccttctta
atcgcggaagtgatcattctcttcctcttcgcattctgggaggacgcggctctgttgctg
ccgcgtgcgctcggatttgccccctaa
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