Ruegeria sp. TM1040: TM1040_2801
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Entry
TM1040_2801 CDS
T00359
Name
(GenBank) histone-like DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sit03032
]
TM1040_2801
03036 Chromosome and associated proteins [BR:
sit03036
]
TM1040_2801
03400 DNA repair and recombination proteins [BR:
sit03400
]
TM1040_2801
DNA replication proteins [BR:
sit03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
TM1040_2801
Chromosome and associated proteins [BR:
sit03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
TM1040_2801
DNA repair and recombination proteins [BR:
sit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
TM1040_2801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
PqqD
Motif
Other DBs
NCBI-ProteinID:
ABF65533
RoseoBase:
TM1040_2801
UniProt:
Q1GCT3
LinkDB
All DBs
Position
2963731..2964024
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AA seq
97 aa
AA seq
DB search
MSKPMTKTQLVAALAEEMDSDKKTAGAALDAVCNLITREVSGGGAVTLPGVGKIYCRERP
EREVRNPATGEKFMKEADKVVKMTIAKALKDSVNGEG
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgatgaccaaaactcagcttgtggcagcactggctgaggaaatggacagc
gacaagaaaaccgctggtgccgctctggatgccgtttgcaacctgatcacccgcgaagtg
tctggcggcggtgccgtgactctgccgggtgttggcaagatctactgccgtgagcgtccc
gagcgcgaagtccgcaacccggcaaccggcgagaagttcatgaaagaagcagacaaggtc
gtgaaaatgaccatcgccaaagcgctcaaggacagcgtcaacggcgaaggctga
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