Ruegeria sp. TM1040: TM1040_2864
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Entry
TM1040_2864 CDS
T00359
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sit03016
]
TM1040_2864
Transfer RNA biogenesis [BR:
sit03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
TM1040_2864
Prokaryotic type
Methyltransferases
TM1040_2864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
ABC_tran
RsgA_GTPase
AAA_28
AAA_29
AIG1
ABC_ATPase
Ras
AAA_18
DUF1221
Motif
Other DBs
NCBI-ProteinID:
ABF65596
RoseoBase:
TM1040_2864
UniProt:
Q1GCM0
LinkDB
All DBs
Position
3032719..3034005
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AA seq
428 aa
AA seq
DB search
METIFALATAQGKAGVAVIRVSGPHAIEIGEKLTRRTLPARGMIFSKLKDSAGEILDEAL
VLSFTSPDSFTGENIVEFQLHGSIAVVSAVMSAIEETGVARLADPGEFTRRALDNGKLDL
TQVEGLADLIDAETEAQRKQAQVILAGTLGDLADRWRTDLIRAASLIEVTIDFADEEVPV
DVTPEVKQLLSGVLHDIEKEVDGVAIAERIREGFEVAIVGSPNVGKSTLLNALAGRTAAI
TSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDDHVEGIGIRLAQERAERADIRVFLA
EEDESFSIQMREGDLRLLPKADERRSAKGAISGRTGQGVDDLVSRISDTLRNRTAHDGIA
TRARHRETMNRAVLSLRQAIEVVEQGPEFYDLAAEDMRSAIRALELLVGRINVENLLDEI
FSSFCLGK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagacgatctttgcgttggccaccgcccaaggaaaggccggtgtcgccgttatacgt
gtatccggtccgcatgcgatcgagatcggcgaaaaactaacgcgcaggacgctacctgcg
cgaggtatgatattttcaaaattgaaagatagcgcaggtgagatccttgatgaggctctg
gtcttgtcgtttacgtcacctgacagcttcaccggcgaaaatatcgtagagtttcaatta
catggcagcatagctgtcgtatctgcagtgatgtctgcgattgaggaaaccggtgttgcg
cgtcttgcggaccccggagagtttacccgccgggcgttggacaacggaaagctcgatcta
actcaggttgagggccttgctgatcttattgatgcggagacggaagctcaaagaaaacag
gcgcaggtcatccttgcaggcacactgggggatctggcagaccgttggcgaacagatctt
attcgtgcggcgtccctgattgaggttacaatcgatttcgcggacgaagaagtacctgtg
gatgtcacgccagaggtaaagcagcttctttctggcgtattgcacgacattgaaaaagag
gtcgatggcgttgctattgccgagcgcattcgcgagggttttgaagtggctattgtcggc
tcgcccaatgtcggaaagtcgacgctcctcaatgcgcttgctgggcgcaccgcagcgatc
acatctgagtatgcgggaacaacgcgcgatgtgatcgaggttcgaatggacctcgctggc
ctaccagttaccttattggatacggccggactgagagagactgacgatcatgttgagggg
attggtatccgtctcgcgcaggagcgcgcagaaagggctgacatccgcgtattcctggcc
gaagaggatgagagtttctcaattcagatgcgagaaggggatctccgactgcttccgaag
gcggatgagcgacggtctgcgaagggcgcgatttctggcagaacagggcagggcgtagat
gacttggtatcgcgtatatcggatacccttagaaatcggactgcccatgatggtattgcg
acaagagcacggcatcgggagacgatgaaccgtgctgtgctgagtttgcgccaagcgatt
gaagtcgttgaacaggggcccgagttttatgacctggcagctgaggacatgagatcggcg
atccgagcgctagagttgctagtgggtcggataaatgtagagaatcttctggatgagatt
ttctcgagtttctgtttgggaaagtaa
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