Ruegeria sp. TM1040: TM1040_2892
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Entry
TM1040_2892 CDS
T00359
Name
(GenBank) ABC transporter related
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_2892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_2892
Transporters [BR:
sit02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
TM1040_2892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
AAA_16
Zeta_toxin
MMR_HSR1
RsgA_GTPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABF65624
RoseoBase:
TM1040_2892
UniProt:
Q1GCJ2
LinkDB
All DBs
Position
3060885..3062723
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AA seq
612 aa
AA seq
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MFRFFENLINPYCDYPETDVPPTRLWPFMREYARPFRSVFWMAGLMSIVVAAIEVGLISY
MGRVVDILAGPPEEVWATHGTELIGMALFILLVRPVLQLVDVLLLNNTILPNFGTLIRWR
AHKHVLRQSVGWFENDFAGRIANRIMQTPPAAGEVVFQVFDAITFALAYLIGAAVLLWGA
DPRLLMPLIIWFVLYAALIRWTIKRVGPASQAASDARSTVTGRVVDSYSNIHSVKMFAHH
SRELDYAKDAIENTRRTFQAEMRIFTIMDGVLVLLNGLLIVGVVGWGIALWMQGLASVGV
VAAATALTLRLNAMTGWIMWALTSFFRQLGVVAEGMETIAQPIELVDTEDAKPLHLSKGE
ITFDALSHHYGRGAGGLDRLNLTIHPGEKVGLVGRSGAGKSTLVMLLLRFYDPEEGRILI
DGQDISQVLQDSLRQHIGMVQQDSSLLHRSVCDNLLYGRPDASEEEMIAAAQKAHAHDFI
LDLEDPQGRKGYDAHVGERGVKLSGGQRQRVTLARVILKDAPILLLDEATSALDSEVEAA
IQETLYGMMEGKTVIAIAHRLSTIAQMDRILVLNEGKIVEQGTHEALLSEGGLYAQFWAR
QSGGFLNIEAAE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcttctttgaaaatctcataaacccctattgcgactatccggaaacggatgtt
ccaccgacccggctctggccattcatgcgagagtacgcccgtcctttccggtctgtcttt
tggatggcggggctgatgtccattgttgtcgccgcaatcgaagttggcttgatctcttat
atggggcgggttgtggacatccttgcaggccccccggaggaagtctgggccacgcatggc
acagagctgatcgggatggccctgttcatcctcttggtgcgaccggtgttgcagctggtg
gatgtgttgctgctcaacaatacgattttgccgaacttcggcacgctgatccgctggcgc
gcgcataaacatgtcctgcggcagtccgtgggttggtttgaaaacgattttgcagggcgc
atcgccaaccgtatcatgcaaacgccgcccgctgcgggcgaggtcgtatttcaggtcttt
gatgcgatcacctttgcgctggcttatctgatcggtgcggcggtattgctctggggtgct
gatccacgtctgttgatgccgctcatcatctggtttgtgctatatgcagccctgatccgt
tggaccatcaagcgggtgggaccggcgagccaggccgcatcggatgcgcgttccactgtg
accgggcgggttgtggacagctattccaacattcattcagtgaaaatgtttgcccaccac
agccgcgagctcgactacgccaaagatgccatcgagaacacgcgccgcacctttcaggcg
gaaatgcggatctttacgatcatggatggcgttcttgtgttgttgaatggcctcctgatt
gtcggggttgtgggttggggcattgcgctctggatgcagggactggcttcggtgggagtt
gtggcagctgcaaccgccttgacgctgcggctgaacgcgatgaccggatggatcatgtgg
gcacttaccagcttcttccgtcaactcggggtcgtggccgaaggcatggaaacgattgcg
caacccatcgagttggtggacaccgaggatgccaaacctttgcatctcagtaaaggagag
atcacctttgacgcgctgtctcatcactacgggcggggcgcgggcgggcttgatcggctt
aaccttacgatccacccgggagaaaaggtcggccttgttgggcgctctggtgctggcaag
tccaccctcgtgatgctgctgctcaggttctatgaccccgaggaagggcgcattctgatc
gacgggcaggatatatcgcaggtgcttcaggatagcctgcgccagcatatcgggatggtg
cagcaagacagctcgctcctgcatcgctcggtctgcgataatcttctctatggtcgcccc
gatgcatccgaagaagagatgatcgcagctgcccagaaggctcacgcgcatgacttcatt
cttgatctcgaagacccccaggggcgcaagggatatgacgcccatgtcggcgaacgtggg
gtgaagctctccggtgggcagagacagcgggtgacgctggcgcgtgtaattttgaaagat
gcacccatccttttgctggacgaggcgacctctgcgctcgactcagaggtcgaggccgcc
atccaggagacgctctatggcatgatggagggcaaaacggtgatcgccatcgcgcatcga
ctttcgaccatcgcgcagatggaccggattttggtgctcaatgagggaaaaatcgtcgaa
cagggtacacacgaagcgcttttgtcagagggtggcctatatgcacagttctgggcgcgc
caatcgggcgggttcctgaatatagaggccgcagaatga
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