Ruegeria sp. TM1040: TM1040_2910
Help
Entry
TM1040_2910 CDS
T00359
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sit03021
]
TM1040_2910
03009 Ribosome biogenesis [BR:
sit03009
]
TM1040_2910
Transcription machinery [BR:
sit03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
TM1040_2910
Ribosome biogenesis [BR:
sit03009
]
Prokaryotic type
rRNA transcription factors
TM1040_2910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
KH_1
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
ABF65642
RoseoBase:
TM1040_2910
UniProt:
Q1GCH4
LinkDB
All DBs
Position
3077203..3078819
Genome browser
AA seq
538 aa
AA seq
DB search
MAITSANQLELLQTAEAVAREKMIDPGLVVEAMEESLARAAKSRYGSEMDIRVSIDRKTG
KATFTRVRTVVEDEELENYQSELTVAQAKQYMEDPKVGDTIVDEVPPVEMGRIAAQSAKQ
VILQKVREAERDRQYEEFKDRNGTIINGVVKREEYGNVIVDIGSGEGILRRNEKIGRESY
RPNDRIRCFIKDVRREPRGPQIFLSRTAPEFMAELFKMEVPEIYDGIIEIKAVARDPGSR
AKIAVVSYDGSIDPVGACVGMRGSRVQAVVNELQGEKIDIIPWNEDQPTFLVNALQPAEV
SKVVLDEEAGKIEVVVPDEQLSLAIGRRGQNVRLASQLTNLDIDIMTEEEESARRQKEFE
ARTALFMETLDLDEFFAQLLVSEGFTNLEEVAYVELDELLVIDGVDEGTAEELQARARDY
LEAKAKAALDNARSMGVEDSLIDFDGLTPQMVEALAKDDVKSLEDFATCADWELAGGWTT
VNGERVKDEGILEPFDVSLEEAQNLVMTARIMLGWVDPAELESDADDLEEEAEGEAEA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctatcacctctgcaaaccagctggagctgttgcaaaccgccgaggccgtggcgcgt
gagaaaatgatcgatcccggtctggtggtcgaagcgatggaagaatccctcgcccgcgcc
gccaagagccgctacggcagcgagatggacattcgtgtctccattgaccgcaagaccggt
aaggcgactttcactcgtgtgcgcaccgtggtcgaagacgaagagctcgaaaactaccag
tccgagctgaccgtcgcgcaggccaagcagtatatggaagaccccaaggtcggcgacacc
atcgttgatgaggttcccccggtcgagatgggccggatcgcggcacaatccgccaagcag
gtgatcctgcagaaagtgcgcgaagcagagcgggatcgtcagtacgaagagttcaaggat
cgcaacggcaccatcatcaatggcgtcgtcaagcgagaggaatacggcaacgtcatcgtc
gatatcggatctggcgaaggcattctgcgtcgcaacgagaaaatcggccgtgagagctat
cgcccgaacgaccgtattcgctgcttcatcaaggacgtacgccgcgaaccccgtggcccg
cagatcttcctcagccgcaccgcgccggagttcatggccgagctcttcaagatggaagtg
cctgaaatctatgacggcatcatcgagatcaaggctgtggcccgtgaccccggttcgcgt
gcaaagatcgctgttgtgtcctatgacgggtcgatcgatccggttggcgcctgtgtcggt
atgcgtggctcccgcgtgcaggcggtcgtgaacgaactgcagggcgaaaagatcgacatc
atcccttggaacgaagatcagccgaccttccttgtgaacgcgctgcagcccgcagaggtc
tccaaggttgtcttggacgaagaagccggcaagatcgaagtggttgtgcccgacgagcag
ctttctctggcgattggccgtcgcggtcagaacgtacgtctggcgtctcagctgaccaac
ctcgacatcgacatcatgacggaagaggaagaatccgcacgccgtcagaaggaattcgag
gcgcgcaccgcactgttcatggaaacgctcgatctcgacgagttctttgcacagcttctg
gtttctgaaggcttcaccaacctcgaagaggtcgcctatgtcgaactcgacgaactcttg
gtgatcgatggcgtcgacgaaggcaccgccgaagaactgcaggcccgcgcgcgcgattat
ctcgaagccaaggccaaggccgcgctcgacaacgcccgcagcatgggcgtcgaggacagc
cttattgactttgacggcctgacaccccagatggttgaggcactggcgaaggatgatgtg
aaatcgcttgaagacttcgcaacctgtgcggactgggagcttgcgggtggctggaccacc
gtcaacggcgagcgtgtcaaggatgaagggattctcgagcccttcgatgtgagcctcgaa
gaggcgcaaaatctggtgatgacggcgcggattatgctcggctgggtcgacccggcagaa
cttgaatccgatgctgatgatctcgaggaagaagccgaaggggaagcggaagcctga
DBGET
integrated database retrieval system
