Ruegeria sp. TM1040: TM1040_2984
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Entry
TM1040_2984 CDS
T00359
Name
(GenBank) extracellular solute-binding protein family 1
KO
K11073
putrescine transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_2984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_2984
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putrescine transporter
TM1040_2984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
ABF65716
RoseoBase:
TM1040_2984
UniProt:
Q1GCA0
LinkDB
All DBs
Position
complement(3148365..3149453)
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AA seq
362 aa
AA seq
DB search
MKTKTATIVSAIALSAAAAASADEVRVYNWSDYIDESLLAKFEEETGIELIYDVFDSNEL
LETKMLAGGSGYDVVVPTGSFLQRQIQAGVFQKIDREKLTNYGNVWDVIQERNARFDPDN
AYSINYMWGTTGLGTNLGKVAEALGDDAPIDSLSLVFDPANMEKLSECGVHFLDAPTEMM
PAALTYLGLDPNTEDKAELERAADVLEAVRPYVQKFHSSEYINALANGDICVAFGWSGDI
LQARDRAAEADNGVEIAYNAPSEGALMWFDQMAIPVDAPNPEAAHKFLDFMLDAQNMATA
SNYVYYANGNKASQEFLEDDVINDPAIYPTPEAMENTYIKAPYSQKAQRVVTRLWTRVKS
GT
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaacggccaccatcgtgtccgccatcgcactcagcgctgctgcagccgca
tcagccgacgaagtccgcgtttacaactggtccgactacatcgacgaatcgctgctggcg
aagttcgaagaagaaaccggcatcgaactgatctatgacgtctttgactccaacgaactg
ctcgagacaaaaatgctcgctggcggctcgggctatgacgtcgtggttcccaccggttcc
ttcctgcagcgtcagatccaggcaggtgtgttccagaagatcgaccgcgagaaacttacc
aactacggcaacgtctgggatgtgatccaagagcgcaacgcgcgctttgaccccgacaac
gcctactccatcaactacatgtggggcaccactggcctcgggaccaaccttggcaaggtt
gccgaagcactgggcgacgatgccccgatcgacagcctgtcgctggtttttgacccggcc
aacatggaaaagctctccgaatgtggtgtgcatttcctcgatgcgcccacagagatgatg
cccgcagccctcacgtatctgggccttgatcccaacaccgaagacaaagcggaactggag
cgggcggcagacgtactggaagcggttcgcccctacgtgcagaagttccactcgtcagaa
tacatcaacgccttggcaaatggtgacatctgcgtcgcctttggctggtctggtgacatc
cttcaggcgcgtgaccgtgcagccgaagccgataacggtgtcgaaattgcatataacgct
ccgtccgaaggggcgctgatgtggtttgaccagatggcgatcccggttgatgcgccaaac
ccggaggccgcacataagttcctcgacttcatgctggatgcgcagaacatggcgaccgcg
tcgaactacgtgtactacgctaacggcaacaaggcgtctcaggagttcctcgaagacgat
gtgatcaatgatccagcgatctaccccacgccggaagccatggagaacacctacatcaaa
gcgccatattctcagaaggcccagcgcgttgtcacccgtctgtggacccgcgtgaagtcc
ggcacctga
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