Ruegeria sp. TM1040: TM1040_2989
Help
Entry
TM1040_2989 CDS
T00359
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM1040_2989
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_2989
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
TM1040_2989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ABF65721
RoseoBase:
TM1040_2989
UniProt:
Q1GC95
LinkDB
All DBs
Position
3154473..3156098
Genome browser
AA seq
541 aa
AA seq
DB search
MSDTTDTGPVLAADGTPLKRSLARALRMQKMRALALIAPLLLFVLLTFILPIGDMLFRSV
ENSIVSETLPRTTAAAQSYDADSGEAPPEYAFDALAYDLVVAAEKKIHTRVGSRLNYENA
GISSLFRKAGRRVDDIGEVYLDQFVDLDPAWEDPQALVALFADPSWAASAGGENEARFEY
SSVAGEALPGATDAYAAWARTIQEEDQDSPTEEEPWAPVYMALYKDLAKNPDAASAFEGE
TAARLAAAAAAIQSPDWETMSTRDAFIKIDDDWADPEVWRTIKTYSSKYTNGYFLNAADF
QKGEDGPELRPELERIYGTLFLRTMIMSLAITVSCIVLGYPVAWILANLPSRTANVLMIL
VLLPFWTSLLVRTSAWKVMLQQQGVINDVLVWLGLVADDARLVMINNQFGTIVAMTHILL
PFMILPMYSVMQTINPSYLRAAKSLGATNWTAFWRVYFPQSVPGIGAGSILVFILAIGYY
ITPELVGGTKGVFISNRIAFHISQSLNWGLAAALGTILLVVVLVLYWAYDKIVGIDNVKL
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacaaccgataccggaccggtccttgctgcagatggcacgccgctaaagcgc
agccttgcacgggcgctccggatgcagaagatgcgcgcgctggcattgatcgccccgctt
ctgctcttcgttctactgacattcatcctgccgatcggcgacatgttgtttcgctcggtc
gagaacagcatcgtttcggagacgttgccgcgaacgaccgcagcggcgcagtcttatgat
gccgacagcggagaagcgccgcctgaatatgcatttgacgcgctggcctatgatctggtt
gttgctgccgagaagaagatccacacacgcgtgggctcgcgcctgaactacgagaacgct
ggtatttcttcgctgttccgcaaggctgggcgccgagtcgatgacattggcgaggtctat
ctcgatcagtttgtcgaccttgaccccgcttgggaagaccctcaggcactggtcgcgctt
tttgccgaccccagctgggccgcctctgccggtggcgaaaacgaagcgcggtttgagtat
tcctctgtggctggcgaggcgctgccgggagcgacggatgcctatgctgcatgggcgcgc
acgatccaagaagaagatcaggacagccccaccgaagaagagccatgggccccggtctat
atggcgctctacaaggatctcgcgaaaaatccggatgcggcatctgcatttgagggtgaa
actgccgcgcggcttgcagcagcagcagcagccatccagtccccggactgggagaccatg
tccacgcgtgatgctttcatcaaaatcgatgacgactgggccgaccccgaagtttggcgc
acgatcaagacctactccagtaaatacaccaatgggtacttcttgaacgcggccgacttc
cagaaaggtgaggatggccctgagctgcgcccggaacttgagcgcatctatggcacactc
tttctgcgcaccatgatcatgtcgctggctatcaccgtaagctgtatcgtgcttggctac
ccggtggcatggattctggcgaacctgccgtcgcgcaccgccaacgtcctgatgattctc
gtcctgctgccgttctggacctctctgctggtgcggacctctgcatggaaagtcatgctg
cagcagcagggcgtcatcaatgatgttctggtctggcttggactggtcgctgacgacgcg
cgtcttgtgatgatcaacaaccagtttggtacaattgtggcgatgacgcacatccttctg
ccgttcatgatcctgccgatgtattcggtgatgcagacgatcaatccgtcctacctgcgt
gcggccaagtcccttggcgcgaccaactggacggccttctggcgggtgtatttcccacag
tcggtgccgggtatcggcgcgggttcgattctcgtcttcatcctggccattggctactac
atcacgccggaactcgtcggcggtaccaagggcgtattcatctcgaaccggatcgccttc
cacatctcgcaatccctcaactggggtcttgcggcggcactcgggacaatcctgctggtg
gtggttctggtgctctactgggcctacgacaagatcgtcggcatcgacaacgtgaagctg
ggataa
DBGET
integrated database retrieval system
