Ruegeria sp. TM1040: TM1040_2990
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Entry
TM1040_2990 CDS
T00359
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM1040_2990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_2990
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
TM1040_2990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ABF65722
RoseoBase:
TM1040_2990
LinkDB
All DBs
Position
3156106..3157281
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AA seq
391 aa
AA seq
DB search
MALTPVQNQTPAFTAAVSAGAGAFFGLFVGTAQGSGLLGLVIGAVLLGALGFVFASMTAQ
EKPIRWAVLVAFAIAGFVLGGLPALVIGALFGWFAGWFIFWLATSRYRATLVPYLTPGQV
LWHYTFRVICGAIFVFLITPILVVMPLSFNAEDFFTFTPEMLRFDPEGYSLKHYRDFFTN
ADWQQALWNSLSIAPMATLLSVGFGTLAAIGLSQPHVPFRRAIMAILISPMIVPLIISAA
GMYFFYSRIGLQGTYFGVVLAHAALGIPFVIITVTATLVGFDRSLTRAAANMGAGPVTTF
FRVQMPLILPGVISGGLFAFITSFDEVVVVLFVGSAGQKTLPWQMFTGLREQISPTILAV
ATILVVISICLLTTVEMLRRRSERLRGMSPS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcacttacacctgttcaaaaccaaacccccgctttcaccgccgcagtgtcggccggc
gcaggggccttctttggcctcttcgtgggtacagctcagggatcgggcctgcttggcctg
gtcatcggagcggtccttctaggcgcactcggatttgtgttcgcatctatgacagcgcag
gaaaaaccgatccgctgggccgttctggtcgcttttgcgattgctggctttgtgctcggc
ggccttcctgcgttggtgatcggcgcgctctttggctggttcgctggctggttcatcttc
tggcttgccacatcgcgctatcgcgcaaccctcgttccgtatctgacaccggggcaagtg
ctttggcactatacgttccgggtcatctgtggtgcgatctttgtgttcctgatcacgccg
atccttgttgtgatgccgctgtcgttcaacgcggaagacttctttaccttcacgccggaa
atgctgcggtttgatcccgaaggctactcactcaagcactatcgcgacttcttcacgaat
gcggactggcagcaggcgctgtggaattcgctttcgattgctccgatggcgacgctcctg
tccgtgggttttggaacgctggccgcaatcggtctcagccagcctcatgtgcctttccgt
cgcgcgatcatggcgatcctgatttcgccgatgattgtgccgctgatcatttcggctgcg
ggcatgtactttttctacagccggatcggcctgcagggcacctactttggcgtggttctg
gcgcatgcggcactgggcattccctttgtgattatcaccgtgaccgcgacgcttgtggga
tttgaccgttctttgacccgcgctgcggcgaacatgggcgctggtcctgtgaccacgttc
ttccgggtgcagatgccgctcattttgcctggcgtgatttcgggtggcctttttgcattc
atcacgtcgttcgacgaagtggtcgtggtgctctttgtcggctcggcaggtcagaaaacg
ctaccatggcagatgtttactggcctacgtgagcagatctcgcccacgatccttgcagtc
gcaacaatcctagtggtgatctcgatctgtctgctgaccaccgtggagatgctgcggcgg
cggagtgaacggcttcgaggcatgagcccgagctaa
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