Ruegeria sp. TM1040: TM1040_3081
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Entry
TM1040_3081 CDS
T00359
Name
(GenBank) OmpA/MotB
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_3081
Transporters [BR:
sit02000
]
Other transporters
Pores ion channels [TC:
1
]
TM1040_3081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON_like
DUF748
BON
Motif
Other DBs
NCBI-ProteinID:
ABF62055
RoseoBase:
TM1040_3081
UniProt:
Q1GMR1
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All DBs
Position
mega:49247..51208
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AA seq
653 aa
AA seq
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MRISSFLIPTAAFAGAAGLSLVVAGFAATALENNSEIVVRRTLDKAGFTWAEVAADGLRV
ELSGEAPDEATRFAAISEVGSVVDAARIIDQMEITPSKGIAPPRFSTEILRNDAGISIIG
LIPSDSDHRALVKKLGAIRGAPQVTDFVETADYPMPKGWTDAMSYALKALALLPRTKISV
EAGAVQITAIADSPEAKEELETELNRMLPPNVHVTLDIAAPRPVISPFTLRYVLGPEGGR
FDACSAESEESRSRILDAARDAGLERQADCTIGLGVPSANWSRAVEVGLEALTSLEQGSI
TFSNGDVTLVAAQGTPEALFDRVVGELENALPQVFVLHAVLPEPEETTADIIPEFTATLS
PEGQVQLRGRLSDNAQKRTVDSYAKARFGSDTVYVATRNSPDLPGVWPIRVLAALDALAQ
LERGSVTVTPELVAVRGMSHVENASAEIARMLSQKLGEAEDYDLDITFEKPPEPEDKLMA
PQLCEAELAAIQRADKIAFEPGSATVAADSARVIDKIAKLLQQCGEIPLEIQGHTDSQGR
EEMNQNLSQARAQSVLNALRARRILTGSFVARGYGEDNPIASNDTEEGREANRRIEFRLI
ESALPQDDAETAEAESDAQSADAEAAPAGDADAQTPETPPAAAAAPEEDTDGQ
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatatcctcgtttctgatccccaccgccgcctttgccggtgcagccggtcttagc
ttggtggttgcgggattcgcggcgacggcgcttgagaacaattccgagatcgtggtgcgc
cgcaccctcgacaaggccggcttcacctgggccgaggttgcggcggatgggctgcgggtg
gaactgtcgggcgaggccccggatgaggccacgcgttttgccgccatttccgaggtcggc
tccgtggtggatgcggcgcggatcatcgaccagatggagatcaccccctccaaagggatc
gccccgccccggttctccaccgagatcctgcgcaatgacgcgggcatctcgattatcggt
ctcattccaagcgacagcgatcaccgcgcactggtgaagaaactcggcgcaatccggggg
gcgccgcaagtcaccgattttgtggaaaccgcagactatccgatgccaaagggctggacg
gatgccatgtcctacgccctgaaggcgctggccctgctgccacgcaccaagatctcggtc
gaggcaggcgctgtgcagatcaccgccattgccgacagccccgaggccaaggaagagctt
gaaacagagctcaaccggatgctgccgccgaacgtgcatgtaacgctcgacattgctgcg
ccgcgcccggtgatctcgccgttcacgctgcgctatgttcttggccccgagggcgggcgc
tttgatgcctgctctgccgagagcgaagaaagccgcagccgtattctggacgcggcccgt
gatgcgggtttggaacgtcaggccgattgcaccatcggtcttggtgtgccctcggccaat
tggtcgcgcgcggtcgaagtcgggcttgaggcactcacgtcgcttgaacagggctcgatc
accttctccaacggcgatgtcacgcttgtggctgcgcagggcacgcccgaggcgcttttc
gatcgggtcgtgggcgagcttgagaacgcgctgccgcaggtttttgtgctgcatgcggtg
ctgcctgagcccgaggagactaccgccgacatcatcccggaattcaccgccaccctcagc
ccggaggggcaggttcagctgcgtggacgtctgagcgacaatgcccagaagcgcactgtc
gacagctatgccaaagcccgctttggcagcgacacggtttatgttgccacccgcaattcg
ccggatctgcccggcgtctggccgatccgtgtgctggccgcgctggatgcgctggcccaa
ctcgaacgcggctcggtcaccgtgacccccgaattggtggcagtgcgcggcatgagtcac
gttgaaaacgccagcgccgagattgcccgcatgctctcgcagaaattaggcgaggcagag
gattacgacctcgacatcacctttgaaaagcccccggagcccgaagacaagctgatggcg
ccgcaactctgcgaggcggaactggcggcgatccagcgcgccgacaagattgcctttgag
ccgggctctgccacggtggccgccgacagtgcgcgcgtgatcgacaagatcgccaagctg
ttgcagcagtgtggcgaaattcctcttgagatccagggccacaccgacagccagggccgt
gaggaaatgaaccagaacctgagccaggcacgggcgcaatcggtcttgaacgctctgcgc
gcgcgccgcatcctgaccgggagctttgtggcgcgcggctatggcgaggacaatccgatc
gccagcaacgacaccgaagagggccgcgaggccaatcgcaggatcgaattccgcctgatc
gaaagcgctctgccacaggacgatgccgaaacagccgaggccgaatccgacgcgcaatcc
gcagatgccgaggccgcgcccgcaggtgatgcggacgcacaaacgcctgaaacacccccc
gccgctgccgcggcccccgaagaggacaccgacggacaatga
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