Ruegeria sp. TM1040: TM1040_3111
Help
Entry
TM1040_3111 CDS
T00359
Name
(GenBank) transcriptional regulator, LysR family
Organism
sit
Ruegeria sp. TM1040
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_20
HTH_AsnC-type
HTH_24
DUF6127
Motif
Other DBs
NCBI-ProteinID:
ABF62085
RoseoBase:
TM1040_3111
UniProt:
Q1GMN1
LinkDB
All DBs
Position
mega:complement(82004..82963)
Genome browser
AA seq
319 aa
AA seq
DB search
MISIINMHQKNLNAIDLNLLKVFSALAAERSVTKAANSVGLSQPAVSHALRRLRDLMDDE
LFIRSTDGMQPTERCRELAPAIDASLKMLQDAMTVKDDNDPANLRATYRLGMNDLFSTLL
VPGLTARVAKQAPNVSLRFLHSMAINQNVDDAYSDLERGRIDLTVIQDFDTPSRFDRELL
GASEFVCVARAGHPVFQPGLSMEQYTSLGHIMFTTLDAEYSRIDEALSKMGIRRRIELRV
PHYSAALSATALTDLVYTVPRILAQHAEQAFGLQVSELPFEAPVRKIFQVWHKTRTKDFG
HQWLRNVVSDVSQLSGIVP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgattagtatcattaatatgcaccagaagaatttgaatgccatcgatttgaatctccta
aaggttttttcggctctcgcggccgaacgaagcgtaaccaaagccgcgaactctgtcgga
ttaagccaacccgcggtcagccatgcgttgcggcggttgcgcgacctgatggatgatgag
ttgttcattcgatcgaccgacggcatgcaaccgaccgagcgctgccgtgagctggcaccg
gccatagacgccagcctaaagatgcttcaggacgctatgacggtgaaggatgacaatgat
ccggccaacctgcgtgcaacttatcgcttgggcatgaatgatctgttttcaacgctgctt
gtgcctggcctcactgcacgtgttgcgaaacaggcaccgaatgtttctttgcggtttttg
cactcgatggcgatcaaccagaacgtcgatgacgcctactcagatttggaacgcggaagg
atcgatctcacggtcattcaggattttgatacaccttcgcgttttgatcgcgaacttctg
ggtgcaagtgagtttgtttgcgtcgctcgtgcagggcacccggtgtttcaaccgggtttg
agcatggagcaatacacgtcgcttggtcacatcatgttcaccacgctggacgccgaatac
agccgtatcgacgaagcactttcaaagatggggattcggcggcggatcgaacttcgtgtg
ccgcattattccgcagcactcagcgcaacggctctgaccgatctggtctacaccgtgccg
cgcatactggctcagcacgccgaacaggctttcggactgcaggtatcggaactgcccttt
gaagctccggtcaggaagatttttcaggtttggcacaaaacccgcaccaaggactttgga
catcaatggctgcgaaacgtcgtttccgacgtttcgcagctctcaggaattgtgccttga
DBGET
integrated database retrieval system
