Ruegeria sp. TM1040: TM1040_3128
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Entry
TM1040_3128 CDS
T00359
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sit03000
]
TM1040_3128
Transcription factors [BR:
sit03000
]
Prokaryotic type
Helix-turn-helix
LacI family
TM1040_3128
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_3
Peripla_BP_4
Sigma54_DBD
HTH_23
HTH_10
HTH_3
HTH_AraC
Sigma70_r4
HTH_IclR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ABF62102
RoseoBase:
TM1040_3128
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All DBs
Position
mega:101920..102945
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AA seq
341 aa
AA seq
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MTNDSKRPLTLRDVSDATGVSEMTVSRVLRNRGDVSEKTRQKVLEAAKELGYVPNKIAGA
LASKRVNLVAVIIPSLSNMVFPEVLTGINRVLEDTELQPVVGVTDYQPEKEEKVLYEMLS
WRPSGVIIAGLEHTEPARAMLAAAGIPVVEIMDTDGNPVDSMVGISHRRAGREMAKAILK
AGYSHIGFMGTKMPLDHRARKRFEGFTEALAKEGVEIEDREFYSGGSALAKGREMTQAML
ERSPELDFLYYSNDMIGAGGLLHLIDQGIDVPGQIGLAGFNGVELLAGLPRQLATMDACR
QEIGMKAAQIIAAQLEDSNAEIEKHVTLTPTITYGDTLKRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacgactccaagcgtccgctgacgctgcgtgatgtttcagatgcaaccggcgtg
tcagaaatgaccgtgagccgcgttctccgcaatcgcggtgatgtctctgaaaagacccga
caaaaggtgttggaggcggcaaaggaactcggctacgtgcccaacaagatcgctggcgcc
ttggcctccaagcgggtcaatttggttgcggttatcatcccgtcgctctccaatatggtc
tttcccgaggttctgaccggtatcaaccgcgtgcttgaggataccgagcttcagccggtt
gttggcgtcaccgactaccaaccggagaaagaagaaaaagttctctacgagatgctctcg
tggcggccgtcgggtgtcattatcgccggtctcgaacacaccgagcccgcgcgcgcaatg
ctcgcagctgcgggcattcctgtggtggagatcatggatacggacggcaatccggtggat
tccatggtcgggatctcccaccgccgtgcgggccgcgagatggccaaggcgatcttgaag
gcaggctatagccatatcgggtttatggggacaaaaatgcccctcgatcaccgtgcccgc
aaacgatttgaaggcttcaccgaagcgctcgccaaagaaggggtcgagatcgaggatcgt
gaattttattcgggtggctctgcgctcgccaagggtcgtgagatgacccaagccatgctt
gagcgctctcccgaactcgactttctgtattattccaatgacatgattggcgccggcggg
ctgcttcacctgattgaccagggaattgacgtgccagggcagattggtcttgcgggcttt
aacggagtggagcttctggcgggcctgccgcggcagctggcgaccatggatgcttgccgt
caggagatcggcatgaaggcggcacaaatcattgcggcccagctcgaagactcaaacgca
gagatcgagaaacatgtaacgctcacaccgaccattacctatggcgatacgctgaaacgg
cgctga
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