Ruegeria sp. TM1040: TM1040_3153
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Entry
TM1040_3153 CDS
T00359
Name
(GenBank) extracellular solute-binding protein family 1
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_3153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_3153
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
TM1040_3153
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_11
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
ABF62127
RoseoBase:
TM1040_3153
UniProt:
Q1GMI9
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All DBs
Position
mega:133822..135075
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AA seq
417 aa
AA seq
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MKSKFMMAALTGTALVATSALAEDVTLTVESWRNDDLTLWQDKIIPAFEAANPGIKVKFT
PSAPTEYNAVLNSKLDAGSAGDLITCRPFDASLALYEAGHLAALDDMDAMSNFSDVAKSA
WQTDDGSASFCVPMASVIHGFIYNKEAFEELGLEVPTTEDEFFAALETIKEDGSYIPMAM
GTNDQWEAATMGYNNIGPNYWKGEEGRRALIAGEQKLTDEQWVAPYATLAKWADYLGDGY
EAQTYPDSQNLFTLGRAAIYPAGSWEISGFNAQADFEMGAFKAPVKSAGDTCYISDHTDI
GIGMNASTEHPEAAKAFLAWVASPEFADIFGNALPGFFPLSNAPVELEDPLAKEFVSWRG
ECESTIRSTYQILSRGTPNLENETWGASVAAIKGTETPEALGEKLQSGLATWYEPQQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaagtttatgatggccgcgctgacgggcactgccctggtggccacttccgca
ctggccgaggatgtcaccctcactgtcgaaagctggcgcaatgacgacctgacgctctgg
caggacaagatcatccccgcgttcgaagccgcaaaccccggcatcaaggtgaaattcacc
cccagcgcgccgaccgaatacaacgcggtcctgaactccaagctggacgcaggctctgct
ggtgatctgatcacctgccgcccgtttgacgcctcgcttgcgctctatgaggcgggccac
ctcgccgcgctggatgatatggacgcgatgagcaacttctctgacgtcgccaaatccgca
tggcagaccgacgatggctccgcgagcttctgtgtgccgatggcctccgtgatccacggc
tttatctacaacaaagaggccttcgaagagctcggccttgaggttccgaccaccgaagac
gaattctttgccgcgcttgagaccatcaaggaagacggcagctatatcccgatggcgatg
ggcaccaacgaccagtgggaagccgccaccatgggctataacaacatcggcccgaactac
tggaaaggcgaagaaggccgtcgcgccctgatcgcgggcgagcagaagctcaccgacgaa
caatgggttgccccctatgcgaccctcgccaaatgggcggattatctgggcgacggctat
gaggcgcagacctatcctgacagccagaacctcttcacgctgggccgcgcggcgatctat
ccggcaggcagctgggaaatttctggcttcaacgcgcaagccgattttgaaatgggcgcc
ttcaaggctccggtcaaatccgcaggcgacacctgctatatctcggaccacaccgacatt
ggtattggcatgaacgcctccaccgagcaccccgaagccgccaaggccttcctcgcctgg
gtcgcatcgcccgagttcgcggacatcttcggcaacgctctgccgggcttcttcccgctc
tccaatgcgccggttgagctcgaagatccgctggccaaggaatttgtaagctggcgtggc
gagtgcgagagcaccatccgctccacctaccagatcctgtcgcgcggcacgccgaacctc
gaaaacgagacctggggcgcatccgttgccgcaatcaaaggcaccgaaacgcccgaagct
ctgggcgaaaaactccagtcgggtctcgcaacctggtacgaaccgcaacagtaa
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