Ruegeria sp. TM1040: TM1040_3174
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Entry
TM1040_3174 CDS
T00359
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_3174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_3174
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
TM1040_3174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Phage_XkdX
DHQS
Motif
Other DBs
NCBI-ProteinID:
ABF62148
RoseoBase:
TM1040_3174
UniProt:
Q1GMG8
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All DBs
Position
mega:155096..156124
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AA seq
342 aa
AA seq
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MKFLNGLSVIALSAFAASSAFAADLTVGVSWSNFQEERWKTDEAAIVAALEEAGAEYISA
DAQSSSAKQLSDIESLIAQGVDALIILAQDAQAIGPAVQAAADEGIPVVAYDRLIEDNRA
FYLTFDNVEVGRMQARAVLEAMPKGNYVMIKGSPTDPNADFLRGGQQEVIQAAVDAGDIK
IVGEAYTDGWLPANAQRNMEQILTANDNKVDAVVASNDGTAGGVVAALTAQGMDGIPVSG
QDGDHAALNRVAKGTQTVSVWKDARDLGNAAGEIAVALAGGTAMEEISGATSWTSPAGTT
MTARFLAPMPVTKENLSAVVDAGWITQEALCQGVENGPAPCN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttttgaacggactgtccgtcatcgcgctgagcgcctttgctgcatcttcggct
tttgccgctgatctgaccgtaggcgtcagctggtcgaactttcaggaagagcgctggaaa
accgacgaagccgcgattgttgccgcactggaggaagcaggcgccgagtatatctctgcc
gatgcgcagtcttcctctgccaagcagctttccgacattgagagcctgatcgcacagggt
gtcgatgcgctgatcatcctcgcacaggacgcacaggccatcggccccgccgtgcaagcg
gctgcggacgagggtatcccggttgtggcttacgaccgcctgatcgaggacaatcgcgcc
ttttacctgaccttcgacaacgtcgaagtgggccggatgcaggcccgcgccgtgctcgag
gcgatgcccaagggcaactacgtcatgatcaaaggctcgcccaccgaccccaacgctgac
ttcctgcggggcggtcagcaagaggtgatccaggcggcagtcgacgccggtgacatcaag
atcgttggcgaagcctacacggacggctggctgcccgccaacgcacagcgcaacatggag
cagatcctgaccgccaacgacaacaaggtcgacgcggttgtggcctccaacgacggcacc
gctggcggtgtggttgcagcgctcaccgcgcagggcatggacggcatcccggtgtccggt
caggacggcgaccacgccgcgctgaaccgcgtcgccaagggcacccagaccgtttccgtc
tggaaagacgcccgtgacctcggcaatgcggcgggtgagatcgccgtggctctggccggt
ggcaccgcgatggaagaaatcagcggcgcgacctcctggacctctccggcaggcaccacc
atgaccgcacggttcctcgcaccgatgccggtgaccaaagagaacctctctgcggttgtg
gatgcaggctggatcacacaggaagcgctttgccagggtgtcgaaaacggcccggccccc
tgcaactga
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