Ruegeria sp. TM1040: TM1040_3175
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Entry
TM1040_3175 CDS
T00359
Name
(GenBank) inner-membrane translocator
KO
K10544
D-xylose transport system permease protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_3175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_3175
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
TM1040_3175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF6223
Motif
Other DBs
NCBI-ProteinID:
ABF62149
RoseoBase:
TM1040_3175
UniProt:
Q1GMG7
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All DBs
Position
mega:156210..157508
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AA seq
432 aa
AA seq
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MTDTTSQPITPQNKRNLFQQLELDVRLLGMIGAFIILCIGFNLVTDGRFLTPRNIFNLTI
QTVSVAIMASGMVFVIVTRHIDLSVGALLATCSAVMAMTQTEFVPHVLGLGLNHPITWIV
AVVVGLVTGTLIGAFHGWMVGYLTIPAFIVTLGGFLVWRNVAWYLTDGQTIGPLDSTFMM
FGGTNGTLGTSLSWILGLVATALALLTLWNSRRAKLAHEFPVKPLWAEGALALIISGSIL
GFVAILNAYEIPSRRLARMFEARGEVMPEGFTQGYGLPISVLILIAVAVVMTLIARRTRL
GRYIFATGGNPDAAELSGINTRMLTVKIFAIMGFLCALSAVVASARLANHSNDIGTLDEL
RVIAAAVIGGTALSGGFGTIYGAILGALIMQSLQSGMAMVGVDAPFQNIVVGTVLVAAVF
IDIIYRKRVGAK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccacgtctcagccaatcaccccacaaaacaagcgcaatctcttccagcag
cttgagctggacgtgcggctattgggtatgattggcgcctttatcatcctctgcatcggg
ttcaatctggtgaccgacgggcggttcttgaccccgcgcaacatcttcaacctgacgatt
cagacggtttccgtggcgatcatggcctctggcatggtgtttgtgatcgttacccgccac
atcgacctgagcgtcggcgcattgctcgcgacctgctcggcagtgatggcgatgacgcaa
accgaatttgtgccccatgttctcgggcttggtctcaaccacccgatcacatggatcgtg
gcagtcgtggtgggtctggtcacgggcacgctgatcggtgccttccacggctggatggtc
ggctatctgacaatcccggcctttatcgtgacgcttggtggctttctcgtctggcgcaac
gtggcgtggtatctgaccgacgggcagaccatcggcccgctcgattccaccttcatgatg
tttggcggcacaaatggcacccttggcacctcgctgagctggattctggggctggtggcc
acggcgttggcgctcctgacactctggaacagccgccgcgcaaagctcgcgcatgaattc
ccggtaaaaccgctctgggccgaaggcgccttggcgctgatcatctccggctcgatcctc
gggtttgtcgcgatcctcaacgcctatgagatcccctcgcgtcgtctggcgcgcatgttc
gaggcccgtggcgaagtgatgcccgaaggcttcacccaaggctacggcctaccgatctcg
gtgctgatcctgatcgcggtggccgtggtcatgaccctgatcgcacgccgcactcggttg
ggtcgctatatcttcgccaccggcggcaatccggatgcggcagagctctcggggatcaac
acccgcatgctcaccgtgaagatctttgccatcatgggctttctctgtgcactctcggca
gtcgtggcctcggcccgtctggcgaaccactccaacgatatcggcaccctggacgaactg
cgcgtcatcgcggcagccgtcattggcggcaccgcgctctcgggtgggtttggcaccatc
tatggcgctatcctcggcgcactcatcatgcaaagccttcagtccggcatggccatggtg
ggtgtcgacgccccgttccagaacatcgttgtgggcaccgtgctggtcgcggccgtcttc
atcgacatcatctatcgcaagcgtgtgggggccaagtaa
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