Ruegeria sp. TM1040: TM1040_3199
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Entry
TM1040_3199 CDS
T00359
Name
(GenBank) proline racemase
KO
K12658
4-hydroxyproline epimerase [EC:
5.1.1.8
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00470
D-Amino acid metabolism
sit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TM1040_3199
Enzymes [BR:
sit01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.8 4-hydroxyproline epimerase
TM1040_3199
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_racemase
PhzC-PhzF
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ABF62173
RoseoBase:
TM1040_3199
UniProt:
Q1GME3
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All DBs
Position
mega:194300..195226
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AA seq
308 aa
AA seq
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MHVIDSHTGGMPTRVILDGSPDLGSGPLCVRAETLSRAHSEFCDSVLLEPRGQPGMVAAL
LVEPVDPECVTGVIYFDADAVLGMCGHGTIGLAVTLAHLGRIDVGTHKIETPAGIVTVEL
HDANTVSVTNIESRRIHHAVSVEVKGHGSFTGDLAYGGNWFFICDAPIEVSTGNIATLTE
LSIAIREACVQNGVCGPDGEAVDHVILRGASPNASSFSRNFVLCPDNEYDRSPCGTGSSG
FVACLAASGQLAEGTEIVLESVIGSAYTLSYRNGPTGGVIPRITGQAYVMAEATLLFATQ
DPFKAGIT
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaatcgacagccataccggcgggatgcccacacgggtcatccttgacggcagc
cccgatcttggatcggggccgctttgtgtgcgggcagaaacactgtcgcgcgcgcattca
gagttttgcgactcggtcctgctcgagccgcgtggccaaccgggcatggttgccgcccta
ttggttgaacccgtggaccccgagtgtgtcaccggggtgatatatttcgatgccgacgcc
gtgttgggcatgtgtgggcatggcaccattgggcttgccgtgacgcttgcgcatttgggc
cggatcgacgttggcacacataagatcgaaacgcctgcagggatcgtgacggtcgaactg
cacgatgcaaacaccgtctctgtaaccaacattgagagccgccgcattcaccacgcggtc
tctgtcgaggtcaaaggacacggcagttttaccggcgacttggcctatggcggcaattgg
ttctttatctgcgatgcaccgatcgaagtgtcgaccggcaatattgcaacgctcaccgaa
ctgtcgatcgcgatcagagaggcctgcgtgcaaaacggcgtctgcggcccggatggcgaa
gccgtggatcatgtgatcctgcgtggcgccagcccgaatgccagcagcttcagccgcaac
tttgtgctctgccccgacaacgaatatgaccgatcgccatgtgggaccggcagctccggc
tttgtggcctgccttgccgcgtcaggccaattggcggaaggcacggagattgtgctcgaa
agcgtcatcggaagcgcctacacgctctcctacaggaatggcccgacgggcggggtgatc
ccgcgcatcactggccaggcctatgtcatggcggaggcaacattgctgtttgcaacacaa
gaccccttcaaagccgggatcacctga
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