Ruegeria sp. TM1040: TM1040_3266
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Entry
TM1040_3266 CDS
T00359
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
sit02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_3266
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
TM1040_3266
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_3266
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
TM1040_3266
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Big-like
Motif
Other DBs
NCBI-ProteinID:
ABF62240
RoseoBase:
TM1040_3266
UniProt:
Q1GM76
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All DBs
Position
mega:267890..268942
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AA seq
350 aa
AA seq
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MKHYLSTVALGAALALATSSAFAQTVGPKGEAATPTASIMVEDGDLETIRSGNHTAALLW
HDQSDFVNAVTAGATDELARAGIEVVATASAGFDAAKQRSDIETALSKDPSIILSLPLDP
VTSAAAFEEAKENGVKLVFLSNVPSDYEHAKDYAAIVTDDLFQMGKQAADALAASMGGAG
TVGWIYHDADYYVTNQRDNAFKTTIENDYPEISIVAEQGISDPARAEDIANAMLLRNPDI
GGIYVTWAGPAEGVLAALRANGNDTTKVVTLDLSEPVALDMVRGGNVAAIVADEAYELGR
AMAAAAILDLLGKDVPPFVVAPAVTVTAENVAEGWMRSLHIDAPKSVTGN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaacactatctcagcaccgtggcgcttggcgccgccctggccctggccacgtcatcg
gcctttgcccagacggttggccccaagggcgaggccgcgacaccaacggcatcgatcatg
gtcgaagacggagacctcgagacgatccgcagcggcaatcacaccgccgcgctcctttgg
catgaccaaagcgattttgtaaatgctgtgacggcaggcgcgaccgatgagctggcgcgc
gccgggatcgaagtcgtcgccaccgcaagcgccgggttcgacgccgccaaacagcgaagc
gatatcgaaaccgccctgagcaaagacccgagcatcatcctgtcactccccctcgatccg
gtaacctctgccgccgcgtttgaggaagccaaggaaaacggcgtgaagctggtgttcctg
tccaacgtgccctctgactatgaacacgcaaaggattacgcggcgattgtcaccgacgat
ctgttccagatgggcaagcaggctgcagacgcgctggccgcatccatgggcggggcgggc
accgtgggctggatctaccatgacgccgactattatgtgaccaaccagcgcgataacgcc
ttcaagaccaccattgaaaacgactacccggaaatttcaatcgtagcagagcaaggcatc
agcgaccctgcccgcgctgaggacattgccaacgcgatgttgctgcgcaaccctgacatc
gggggcatctacgtgacctgggctggtcccgccgagggcgttctggccgcacttcgggca
aatggcaatgacaccaccaaagtggtgacgcttgatctctcggagccggtggcgctcgat
atggttcggggcggcaatgttgcagccatcgttgccgacgaagcctatgagctaggccgc
gccatggccgcagctgcgatccttgatcttttgggcaaggacgtccctccattcgtggtg
gcccccgcagtgaccgtcaccgctgagaatgtggccgaaggctggatgcgatccctgcac
atcgacgccccaaagagcgtcactggcaactga
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