Ruegeria sp. TM1040: TM1040_3363
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Entry
TM1040_3363 CDS
T00359
Name
(GenBank) transcriptional regulator, GntR family
KO
K03710
GntR family transcriptional regulator
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sit03000
]
TM1040_3363
Transcription factors [BR:
sit03000
]
Prokaryotic type
Helix-turn-helix
GntR family
TM1040_3363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GntR
UTRA
HTH_DeoR
Rrf2
HTH_Crp_2
WHD_DprA
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ABF62335
RoseoBase:
TM1040_3363
LinkDB
All DBs
Position
mega:374370..375119
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AA seq
249 aa
AA seq
DB search
MVYQFFLQGKLLPMTDAPISATSIPLYLQISESLIREIAAGRLVDGERLPPERQLAAQYG
TTVRTLRKALLELEKQSLLERVQGSGNYVRSSQSAQSIYSMFRLELHQGGGLPHADILSV
DYVKKPDDLPAFGTSAHGNRIRRLRYLDGVKIAIEEIWLDGDSGRVDPAQMSDSLYRYYR
LNLGFWITRAEDRVSIARVPEWTPESFTKPAGEITGYIERFSWAQTPDAVEFSRTWFDTD
KALYVQRLT
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggtgtatcaattttttctgcaaggcaagctccttcccatgacagatgcgcctatttcc
gccacgtcgatcccgctctacctccaaatcagcgagtccctgatccgggaaattgcagcg
ggacggcttgtggacggagagcgcctgccgccagagcggcagctggccgcccagtatggc
acaacggtgcggacgctacgcaaagccttgttagaacttgaaaaacagagccttctcgag
cgcgtccaagggtccggaaattacgtcagatcaagccagagcgcacagagcatctactcg
atgtttcgccttgagctacaccaaggcggcggcctaccgcacgcggatattctcagcgtg
gactatgtcaaaaagccggatgatctgccagcatttggcacctctgcccacggcaatcga
atccgccggcttcggtatctggatggcgtcaaaatcgcgatcgaggaaatctggctggac
ggagactcgggtcgcgtcgaccccgcgcagatgtctgattctctctatcgctactaccgg
ctgaacctcgggttctggatcacccgcgccgaagatcgcgtttcaatcgcgcgggttcca
gagtggacaccagagagtttcaccaagcctgcgggcgaaataaccggatatatcgaacgc
ttttcctgggcacagacgcccgatgcggtcgagttttcccgaacatggtttgacacggac
aaggcactttatgtgcagcgtctgacgtag
DBGET
integrated database retrieval system
