Ruegeria sp. TM1040: TM1040_3504 Help Entry TM1040_3504       CDS       T00359                                  Name (GenBank) dihydrolipoamide dehydrogenase   KO K00382   dihydrolipoyl dehydrogenase [EC:1.8.1.4] Organism sit  Ruegeria sp. TM1040 Pathway sit00010   Glycolysis / Gluconeogenesis sit00020   Citrate cycle (TCA cycle) sit00260   Glycine, serine and threonine metabolism sit00280   Valine, leucine and isoleucine degradation sit00310   Lysine degradation sit00380   Tryptophan metabolism sit00620   Pyruvate metabolism sit00630   Glyoxylate and dicarboxylate metabolism sit00640   Propanoate metabolism sit00670   One carbon pool by folate sit00785   Lipoic acid metabolism sit01100   Metabolic pathways sit01110   Biosynthesis of secondary metabolites sit01120   Microbial metabolism in diverse environments sit01200   Carbon metabolism sit01210   2-Oxocarboxylic acid metabolism sit01240   Biosynthesis of cofactors Module sit_M00009   Citrate cycle (TCA cycle, Krebs cycle) sit_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate sit_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA sit_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA sit_M00621   Glycine cleavage system Brite KEGG Orthology (KO) [BR:sit00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     TM1040_3504    00020 Citrate cycle (TCA cycle)     TM1040_3504    00620 Pyruvate metabolism     TM1040_3504    00630 Glyoxylate and dicarboxylate metabolism     TM1040_3504    00640 Propanoate metabolism     TM1040_3504   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     TM1040_3504    00280 Valine, leucine and isoleucine degradation     TM1040_3504    00310 Lysine degradation     TM1040_3504    00380 Tryptophan metabolism     TM1040_3504   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     TM1040_3504    00670 One carbon pool by folate     TM1040_3504  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sit04147]     TM1040_3504 Enzymes [BR:sit01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      TM1040_3504 Exosome [BR:sit04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    TM1040_3504 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA HI0933_like FAD_binding_2 NAD_binding_8 Thi4 DAO AlaDh_PNT_C Lys_Orn_oxgnase FAD_binding_3 3HCDH_N UDPG_MGDP_dh_N Lycopene_cycl Motif Other DBs NCBI-ProteinID:  ABF62476 RoseoBase:  TM1040_3504 UniProt:  Q1GLJ0 LinkDB All DBs Position mega:complement(540502..541899) Genome browser AA seq 465 aa AA seqDB search MASYDVIVIGAGPGGYVSAIRCAQLGLKTAIVEGRETLGGTCLNVGCIPSKALLHATHML HEAEHNFGAMGLKGKSPSVDWNQMKSYKDEVIGQNTGGVEFLMKKNKIDWIKGWASIPEA GKVKVGDDTHEAKNIIIASGSVPSALPGVEVDNDKGLVVDSTGALELPKVPKKMVVIGAG VIGLELGSVYARLGAEVTVVEYMDAVCPGMDKDVQRGFKRILEKQGLSFIMGAAVKGVET TKSKAKVSYEPKKGGDAEVIEADVVLVATGRKPYAEGLGLDALGVKMTERGQIATDAQWA TNVKGIYAIGDVIEGPMLAHKAEDEGMAVAEVIAGKHGHVNYGVIPGVVYTTPEVATVGA TEDALKAEGRKIKVGKFMFMGNARAKAVHQAEGGFVKLIADKETDRILGAAIIGPGAGDL IHEICVAMEFGASAEDLALTCHAHPTYSEAVREAALACGDGAIHS NT seq 1398 nt NT seq  +upstreamnt  +downstreamnt atggcatcctatgacgtcatcgtaatcggcgccggtcccggcggctatgtcagcgcaatc cgctgcgcccagctgggcctcaagaccgccatcgtagaaggccgcgaaacccttggcggc acctgcctcaacgtgggctgcatcccctccaaggcgctcttgcacgcaacccatatgctg catgaagcagagcacaacttcggcgccatgggtctcaagggcaaaagcccctcggtcgac tggaaccagatgaaatcctacaaggatgaggtcatcggccagaacaccggcggtgtcgag ttcctcatgaagaagaacaagatcgactggatcaagggctgggcgtcgatccccgaggcg ggcaaggtcaaagtgggcgacgacacccatgaggccaagaacatcatcatcgcctccggc tccgtgccctccgccctgccgggtgtcgaggtcgacaacgacaagggccttgtggtcgac agcaccggcgctctggaactgcccaaagtcccgaagaaaatggtcgtgatcggcgcaggc gtcattggcctcgagctcggctcggtctacgcgcgccttggcgcagaggtcaccgtggtc gaatatatggacgcggtctgtcccggcatggacaaggacgtccagcgcggcttcaaacgc atccttgaaaagcagggcctcagcttcatcatgggggccgccgtcaagggcgttgaaacc acgaaatccaaggccaaagtctcttatgagcccaaaaaaggcggcgacgcagaggtcatc gaggccgatgtggtgctcgtcgccacggggcgcaaaccctatgccgaaggccttggcctc gacgcgcttggcgtcaagatgaccgaacgcggccagatcgccaccgacgcgcaatgggcc acgaacgtcaaaggcatctacgccatcggcgacgtcatcgagggtccgatgctcgcgcat aaggccgaagacgaaggcatggccgtggccgaagtgatcgcgggcaaacatggccacgtg aattacggcgtcattcccggtgtggtctacaccaccccagaggtggcgaccgtcggtgcc accgaagacgcgctcaaggccgaaggtcgcaagatcaaggtgggcaagttcatgttcatg ggcaacgcccgcgccaaggccgtgcatcaggccgagggtggttttgtgaaactgattgcc gacaaggaaaccgaccgcatcctcggtgcggccatcatcggccccggtgcaggcgatctg atccacgagatctgtgtggcgatggaatttggcgcctccgccgaggatctggcgctgacc tgccacgcgcatccgacctattccgaggccgtgcgcgaagcagcccttgcctgcggcgac ggcgcgatccacagttaa

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